RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 AKAP14Q86UN6 197 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 C1orf158Q8N1D5 194 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 ZNF283Q8N7M2 679 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 OR4X2Q8NGF9 303 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 OR51T1Q8NGJ9 327 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 DCUN1D1Q96GG9 259 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 ZNF471Q9BX82 626 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 FAM215AQ9Y5M1 114 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 EIF3AQ14152 1382 aaKnown RBP2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 WDR90Q96KV7 1748 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 RFPL4AA6NLU0 287 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 TMEM238C9JI98 176 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 RFPL4AL1F8VTS6 287 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 SRP19P09132 144 aaKnown RBP2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 IDH3GP51553 393 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 PSME3P61289 254 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 AKR1C1Q04828 323 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 SRSF6Q13247 344 aaKnown RBP2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 SS18Q15532 418 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 MIAQ16674 131 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 GUK1Q16774 197 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 GLT8D1Q68CQ7 371 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 DNAJC30Q96LL9 226 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 OR52E6Q96RD3 313 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 IMMP2LQ96T52 175 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 CENPHQ9H3R5 247 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 NDUFB11Q9NX14 153 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 RBM7Q9Y580 266 aaKnown RBP2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 RALGAPA2Q2PPJ7 1873 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 CAMSAP1Q5T5Y3 1602 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 ANKRD30AQ9BXX3 1397 aa2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 PCF11O94913 1555 aaKnown RBP2.19□□□□□ -2.06
HMGB3P31-201ENST00000413333 PBRM1Q86U86 1689 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 ADAMTS7Q9UKP4 1686 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 A0A0J9YY10 115 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 A0A1B0GX78 115 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 SMIM9A6NGZ8 99 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 H3BT86 120 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 KLRC4O43908 158 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 CREBL2O60519 120 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 TFPTP0C1Z6 253 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 OR4E1P0C645 316 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 P0DMU3 169 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 FAM231AP0DMU4 169 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 FAM231CP0DMU5 169 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 G0S2P27469 103 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 DEFA1P59665 94 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 ARPC4P59998 168 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 HES1Q14469 280 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 KCNJ8Q15842 424 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 ACOT6Q3I5F7 207 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 ZNF705AQ6ZN79 300 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 OR5J2Q8NH18 312 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 DGCR14Q96DF8 476 aaKnown RBP2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 ERMAPQ96PL5 475 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 PRRT1Q99946 306 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 ULBP3Q9BZM4 244 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 HHLA3Q9XRX5 114 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 FLT4P35916 1363 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 ROCK1Q13464 1354 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 DHX57Q6P158 1386 aaKnown RBP2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 MPDZO75970 2070 aa2.18□□□□□ -2.06
HMGB3P31-201ENST00000413333 LEPROTO15243 131 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 FADS1O60427 444 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 FABP1P07148 127 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 HIST1H1TP22492 207 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 PEBP1P30086 187 aaKnown RBP2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 ZNF90Q03938 601 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 SPA17Q15506 151 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 PABPC1L2AQ5JQF8 200 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 C20orf196Q8IYI0 205 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 LRRC25Q8N386 305 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 ANKRD29Q8N6D5 301 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 AP3S1Q92572 193 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 Q9BRP9 147 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 TLNRD1Q9H1K6 362 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 MRPL40Q9NQ50 206 aaKnown RBP2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 NAT8Q9UHE5 227 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 STOML2Q9UJZ1 356 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 FUT9Q9Y231 359 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 PTPRSQ13332 1948 aa2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 WRNQ14191 1432 aaPredicted RBP eCLIP2.17□□□□□ -2.06
HMGB3P31-201ENST00000413333 DOCK5Q9H7D0 1870 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 TRBV20OR9-2A0A075B6H5 130 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 TRAV41A0A0B4J266 112 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 A0A0J9YW62 118 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 LOC105371267A0A1B0GV96 52 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 GGT3PA6NGU5 568 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 H0YJX3 145 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 J3QQQ9 107 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 HLA-DRB1P01911 266 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 HLA-DMBP28068 263 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 RPL5P46777 297 aaKnown RBP2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 TPI1P60174 286 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 RPL26P61254 145 aaKnown RBP2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 SNRPD2P62316 118 aaKnown RBP2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 ERHP84090 104 aaKnown RBP2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 Q6ZS49 121 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 TEX47Q8TBZ9 253 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms