RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ATP1A1-AS1Q5TC04 95 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 SLC25A40Q8TBP6 338 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 ZPLD1Q8TCW7 415 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 PSG11Q9UQ72 335 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF256Q9Y2P7 627 aaPredicted RBP7.26□□□□□ -1.25
PBRM1-209ENST00000412587 GBF1Q92538 1859 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 IGHV2-26A0A0B4J1V2 119 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 DEFB108AA8MXU0 73 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 IL11P20809 199 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 GAGE13Q4V321 117 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 PPP1R32Q7Z5V6 425 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF441Q8N8Z8 693 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 RPEQ96AT9 228 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 GNB1LQ9BYB4 327 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 MS4A5Q9H3V2 200 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 WFDC1Q9HC57 220 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 F11RQ9Y624 299 aaKnown RBP7.26□□□□□ -1.25
PBRM1-209ENST00000412587 J3QT63 122 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 SNAI2O43623 268 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 TOMM40O96008 361 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 IGKV3-11P04433 115 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 PFN1P07737 140 aaKnown RBP7.25□□□□□ -1.25
PBRM1-209ENST00000412587 ACSM6Q6P461 480 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM45BQ96B21 275 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 CITED2Q99967 270 aaPredicted RBP7.25□□□□□ -1.25
PBRM1-209ENST00000412587 AGMATQ9BSE5 352 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 SH2D2AQ9NP31 389 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 LOC101059948A0A1B0GTJ6 334 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 PRR33A8MZF0 331 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 C22orf46C9J442 243 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 K7ESF4 209 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 KLF4O43474 513 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 IL4P05112 153 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 CDKN1AP38936 164 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 CA7P43166 264 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 FAM131CQ96AQ9 280 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 YAE1D1Q9NRH1 226 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 SCN5AQ14524 2016 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 CEACAM3P40198 252 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 MGAT2Q10469 447 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 IGFBP7Q16270 282 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 MOGAT3Q86VF5 341 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 GAPTQ8N292 157 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 TIMM9Q9Y5J7 89 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 RALGAPA2Q2PPJ7 1873 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 A0A0G2JMZ2 1700 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 LRRC37A2A6NM11 1700 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 FAM231BA6NCW3 169 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 J3QR06 171 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 PF4V1P10720 104 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
PBRM1-209ENST00000412587 ADAMTSL5Q6ZMM2 481 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 Q6ZWC4 215 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
PBRM1-209ENST00000412587 DENND4AQ7Z401 1863 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 COX7A1P24310 79 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 HIST1H4GQ99525 98 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 SBF1O95248 1867 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 IGHV3-43A0A0B4J1X8 118 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 TMPRSS2O15393 492 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 FCGR3BO75015 233 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 IGHV3-43DP0DP04 118 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 NEUROG1Q92886 237 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 GFI1Q99684 422 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 RTN4RQ9BZR6 473 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF319Q9P2F9 582 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 RNF7Q9UBF6 113 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 SCN2AQ99250 2005 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 NBASA2RRP1 2371 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 NCBP2LA6PVI3 153 aaKnown RBP7.24□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM229AB2RXF0 380 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 K7EP34 96 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 TYMSP04818 313 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 HGFACQ04756 655 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 FDX2Q6P4F2 183 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM230Q96A57 120 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 GRAMD2BQ96HH9 432 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 TIMP4Q99727 224 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 PIMREGQ9BSJ6 248 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 NBEAP1P0C6P0 100 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 RIGQ13278 110 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 FAM90A2PQ658T7 463 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 C10orf126Q8N4M7 172 aa7.24□□□□□ -1.25
PBRM1-209ENST00000412587 LSM10Q969L4 123 aaKnown RBP7.24□□□□□ -1.25
PBRM1-209ENST00000412587 IL18BPO95998 194 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 PSG4Q00888 419 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 OR9G4Q8NGQ1 327 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 DOCK6Q96HP0 2047 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 PGPEP1LA6NFU8 196 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 H3BRM9 83 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 PSG5Q15238 335 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 CALHM1Q8IU99 346 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM56-RWDD3S4R434 201 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 INTS1Q8N201 2190 aaKnown RBP7.23□□□□□ -1.25
PBRM1-209ENST00000412587 C1QTNF9BB2RNN3 333 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 P01737 135 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 IGHV3-13P01766 116 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 IGHV3-7P01780 117 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 Q0VG73 95 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms