RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 P0C879 139 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 RPA2P15927 270 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 G6PCP35575 357 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 MYCNOSP40205 109 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 RPL27AP46776 148 aaKnown RBP10.21□□□□□ -0.77
HDAC8-210ENST00000412342 OR2B8PP59922 312 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 TMEM65Q6PI78 240 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 MRPL41Q8IXM3 137 aaKnown RBP10.21□□□□□ -0.77
HDAC8-210ENST00000412342 TOMM5Q8N4H5 51 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 GDPD1Q8N9F7 314 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 DMBX1Q8NFW5 382 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 DEDD2Q8WXF8 326 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 TMEM230Q96A57 120 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 MS4A10Q96PG2 267 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 DUX3Q96PT4 197 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 SPIN2AQ99865 258 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 SPIN2BQ9BPZ2 258 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 SLA2Q9H6Q3 261 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 VSIG4Q9Y279 399 aa10.21□□□□□ -0.77
HDAC8-210ENST00000412342 NOTCH1P46531 2555 aa10.21□□□□□ -0.78
HDAC8-210ENST00000412342 MEGF8Q7Z7M0 2845 aa10.21□□□□□ -0.78
HDAC8-210ENST00000412342 C3orf85A0A1B0GTC6 90 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 HMX3A6NHT5 357 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 PF4P02776 101 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 UCP1P25874 307 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 AP3S2P59780 193 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 ZNF45Q02386 682 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 KLK9Q2XQG4 91 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 SAMD5Q5TGI4 173 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 LINC00299Q6ZSB3 139 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 TTC9CQ8N5M4 171 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 CCDC71LQ8N9Z2 235 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 PHB2Q99623 299 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 AKIP1Q9NQ31 210 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 MCUBQ9NWR8 336 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 COPZ2Q9P299 210 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 SCP2D1Q9UJQ7 156 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 KLK9Q9UKQ9 250 aa10.2□□□□□ -0.78
HDAC8-210ENST00000412342 TRBV9A0A0B4J1U6 114 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 IGLC7A0M8Q6 106 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 CRYM-AS1A6NIL9 109 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 DBX1A6NMT0 343 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 NPIPB5A8MRT5 1133 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 CCL24O00175 119 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 IGKV1-5P01602 117 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 TRGV3P03979 118 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 CRYGCP07315 174 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 LGALS1P09382 135 aaKnown RBP10.19□□□□□ -0.78
HDAC8-210ENST00000412342 AREGP15514 252 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 TPPP2P59282 170 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 ERVK-16P61578 105 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 DEFA5Q01523 94 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 SP6Q3SY56 376 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 C19orf35Q6ZS72 473 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 FYTTD1Q96QD9 318 aaKnown RBP10.19□□□□□ -0.78
HDAC8-210ENST00000412342 ALX4Q9H161 411 aaPredicted RBP10.19□□□□□ -0.78
HDAC8-210ENST00000412342 NAA60Q9H7X0 242 aa10.19□□□□□ -0.78
HDAC8-210ENST00000412342 C14orf166Q9Y224 244 aaKnown RBP10.19□□□□□ -0.78
HDAC8-210ENST00000412342 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 C15orf61A6NNL5 157 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 G3V4G9 280 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 B3GALNT1O75752 331 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 PRH1P02810 166 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 OR5AC1P0C628 307 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 CTRB1P17538 263 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 FAUP35544 74 aaKnown RBP10.18□□□□□ -0.78
HDAC8-210ENST00000412342 CTRB2Q6GPI1 263 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 LHFPL5Q8TAF8 219 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 GLYATL2Q8WU03 294 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 OR5B12Q96R08 314 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 TMEM222Q9H0R3 208 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 TMEM14BQ9NUH8 114 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 COA4Q9NYJ1 87 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 ZNF257Q9Y2Q1 563 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 NSG2Q9Y328 171 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 NOTCH3Q9UM47 2321 aa10.18□□□□□ -0.78
HDAC8-210ENST00000412342 A0A0G2JRQ6 117 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 CDS2O95674 445 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 IGHV3-11P01762 117 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 SERPINE2P07093 398 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 IL7P13232 177 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 PSMB6P28072 239 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 CD40LGP29965 261 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 SUPT4H1P63272 117 aaKnown RBP10.17□□□□□ -0.78
HDAC8-210ENST00000412342 KPRPQ5T749 579 aaPredicted RBP10.17□□□□□ -0.78
HDAC8-210ENST00000412342 ZNF57Q68EA5 555 aaPredicted RBP10.17□□□□□ -0.78
HDAC8-210ENST00000412342 GALNT14Q96FL9 552 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 SRSF8Q9BRL6 282 aaKnown RBP10.17□□□□□ -0.78
HDAC8-210ENST00000412342 QTRT1Q9BXR0 403 aaKnown RBP10.17□□□□□ -0.78
HDAC8-210ENST00000412342 COMMD5Q9GZQ3 224 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 NDUFA4L2Q9NRX3 87 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 ZNF355PQ9NSJ1 428 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 PTTG2Q9NZH5 202 aa10.17□□□□□ -0.78
HDAC8-210ENST00000412342 IGHV4OR15-8A0A075B7B6 117 aa10.16□□□□□ -0.78
HDAC8-210ENST00000412342 A0A087WW49 117 aa10.16□□□□□ -0.78
HDAC8-210ENST00000412342 TEX13DA0A0J9YY54 714 aaPredicted RBP10.16□□□□□ -0.78
HDAC8-210ENST00000412342 IGLL1P15814 213 aa10.16□□□□□ -0.78
HDAC8-210ENST00000412342 CD33P20138 364 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms