RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CEPT1Q9Y6K0 416 aa10.97□□□□□ -0.65
MCF2L-210ENST00000409954 PPP5D1E7EU14 171 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 UPK2O00526 184 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 CYB5BO43169 146 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 TNFSF12O43508 249 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 XRCC3O43542 346 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 CLEC3BP05452 202 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 GUCA2BQ16661 112 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 COMMD5Q9GZQ3 224 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 RNF167Q9H6Y7 350 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 PLEKHA2Q9HB19 425 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 ZC4H2Q9NQZ6 224 aa10.96□□□□□ -0.65
MCF2L-210ENST00000409954 A0A1B0GW64 132 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 ZNF320A2RRD8 509 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 OR11H12B2RN74 326 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 SULT1C2O00338 296 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 HLA-AP01891 365 aaKnown RBP10.95□□□□□ -0.66
MCF2L-210ENST00000409954 PTHLHP12272 177 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 AREGP15514 252 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 OR2B8PP59922 312 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 THOC7Q6I9Y2 204 aaKnown RBP10.95□□□□□ -0.66
MCF2L-210ENST00000409954 SLC16A13Q7RTY0 426 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 HSD17B13Q7Z5P4 300 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-210ENST00000409954 CADM3Q8N126 398 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 MARC2Q969Z3 335 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 GPHA2Q96T91 129 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 HIPK2Q9H2X6 1198 aa10.95□□□□□ -0.66
MCF2L-210ENST00000409954 RYR3Q15413 4870 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 IGLV11-55A0A075B6I3 123 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 LCE6AA0A183 80 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 CD7P09564 240 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 PTBP1P26599 531 aaKnown RBP eCLIP10.94□□□□□ -0.66
MCF2L-210ENST00000409954 GNRHRP30968 328 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 FXYD4P59646 89 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 NEDD8Q15843 81 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 KCTD21Q4G0X4 260 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 ZNF57Q68EA5 555 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-210ENST00000409954 CCDC140Q96MF4 163 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 PLEKHA3Q9HB20 300 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 IFT46Q9NQC8 304 aa10.94□□□□□ -0.66
MCF2L-210ENST00000409954 TRAV25A0A0B4J276 109 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 CGB1A6NKQ9 187 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 A8MWP6 167 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 IGHV3-23P01764 117 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 ELLP55199 621 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-210ENST00000409954 HERV-K104P61576 105 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 ZNF818PQ6ZRF7 136 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 UXS1Q8NBZ7 420 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 DMBX1Q8NFW5 382 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 VN1R17PQ8TDU5 208 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 COMMD9Q9P000 198 aa10.93□□□□□ -0.66
MCF2L-210ENST00000409954 MRPL27Q9P0M9 148 aaKnown RBP10.93□□□□□ -0.66
MCF2L-210ENST00000409954 IGLC7A0M8Q6 106 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
MCF2L-210ENST00000409954 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
MCF2L-210ENST00000409954 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
MCF2L-210ENST00000409954 TRAPPC2P0DI81 140 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 TRAPPC2BP0DI82 140 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 C8orf88P0DMB2 117 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 F2RP25116 425 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 ERVK-16P61578 105 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 AADACL3Q5VUY0 350 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 PLET1Q6UQ28 207 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 C19orf35Q6ZS72 473 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 CMTM1Q8IZ96 169 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 OR1L8Q8NGR8 309 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 OR6F1Q8NGZ6 308 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 OR51H1Q8NH63 302 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 WDR89Q96FK6 387 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-210ENST00000409954 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 QTRT1Q9BXR0 403 aaKnown RBP10.92□□□□□ -0.66
MCF2L-210ENST00000409954 SRD5A3Q9H8P0 318 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 EHFQ9NZC4 300 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 UFC1Q9Y3C8 167 aa10.92□□□□□ -0.66
MCF2L-210ENST00000409954 TRAV3A0A0B4J244 114 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 TEX50A0A1B0GTY4 177 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 TMEM213A2RRL7 107 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 PGLYRP1O75594 196 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-210ENST00000409954 REG1AP05451 166 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 FCER2P06734 321 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 SERPINE2P07093 398 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 MYOD1P15172 320 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 NAT1P18440 290 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 PRSS3P35030 304 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 RPS19P39019 145 aaKnown RBP10.91□□□□□ -0.66
MCF2L-210ENST00000409954 RFX2P48378 723 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 TAS2R46P59540 309 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 UBE2NLQ5JXB2 153 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 LPCAT3Q6P1A2 487 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 RBPMS2Q6ZRY4 209 aaKnown RBP10.91□□□□□ -0.66
MCF2L-210ENST00000409954 TMEM17Q86X19 198 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 OR52B4Q8NGK2 314 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 ZNF502Q8TBZ5 544 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 VCX3AQ9NNX9 186 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 TMEM140Q9NV12 185 aa10.91□□□□□ -0.66
MCF2L-210ENST00000409954 FKBP11Q9NYL4 201 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms