RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 GFOD1Q9NXC2 390 aa10.88□□□□□ -0.67
LIMS1-204ENST00000409441 A0A087X0M5 115 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 CENPVL3A0A0U1RRI6 287 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 A0A1B0GX30 115 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 H3BP45 60 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 AGPAT2O15120 278 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 SCAF4O95104 1147 aaKnown RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 LY86O95711 162 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 IGHV3-7P01780 117 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 SFTA3P0C7M3 94 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 IAPPP10997 89 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 COX7A1P24310 79 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 DUTP33316 252 aaKnown RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 G6PCP35575 357 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 KIR2DS2P43631 304 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 BRWD1-AS2P59051 145 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 TMEM267Q0VDI3 215 aaPredicted RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 GUCA2BQ16661 112 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 GUK1Q16774 197 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 FAM120AOSQ5T036 256 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 HCP5Q6MZN7 132 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 Q71RC1 249 aaPredicted RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 ABHD12Q8N2K0 398 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 PNKDQ8N490 385 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 OR13D1Q8NGV5 346 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 SCGB1C1Q8TD33 95 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 PSMG3Q9BT73 122 aaPredicted RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 RBKSQ9H477 322 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 LINC00473A8K010 186 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 KRASP01116 189 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 KLRD1Q13241 179 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 OR2B11Q5JQS5 317 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 AKR1C8PQ5T2L2 129 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 TMEM14EPQ6UXP3 125 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 NANPQ8TBE9 248 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 CIB3Q96Q77 187 aaPredicted RBP10.87□□□□□ -0.67
LIMS1-204ENST00000409441 SCRT1Q9BWW7 348 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 CLEC7AQ9BXN2 247 aa10.87□□□□□ -0.67
LIMS1-204ENST00000409441 IGHV3OR16-10A0A075B7F0 116 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 IGHV2-26A0A0B4J1V2 119 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 TSPAN4O14817 238 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 HPRT1P00492 218 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 HBE1P02100 147 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 FHITP49789 147 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 UBE2E1P51965 193 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 RAB2AP61019 212 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 ATP6V1FQ16864 119 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 KLF17Q5JT82 389 aaPredicted RBP10.86□□□□□ -0.67
LIMS1-204ENST00000409441 SLC25A24Q6NUK1 477 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 OR11H6Q8NGC7 330 aa10.86□□□□□ -0.67
LIMS1-204ENST00000409441 F8P00451 2351 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 TRAV40A0A0B4J280 105 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 IGHV1-69DA0A0B4J2H0 117 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 LOC105371267A0A1B0GV96 52 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 A0A1W2PPE3 182 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 A0A1W2PRD5 423 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 A0A1W2PRF3 423 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 A0A1W2PRM7 423 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 IGHV1-69P01742 117 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 ZNF134P52741 427 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 PRRX1P54821 245 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 LRRC75BQ2VPJ9 315 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 AARDQ4LEZ3 155 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 SPANXN5Q5MJ07 72 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 DHRS7BQ6IAN0 325 aaPredicted RBP10.85□□□□□ -0.67
LIMS1-204ENST00000409441 HAPLN4Q86UW8 402 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 LILRB2Q8N423 598 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 TEX29Q8N6K0 151 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 OR9G1Q8NH87 305 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 R3HDM4Q96D70 268 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 IFI27L2Q9H2X8 130 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 TMEM160Q9NX00 188 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 PRELID3BQ9Y3B1 194 aa10.85□□□□□ -0.67
LIMS1-204ENST00000409441 FAM74A7A6NL05 159 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 MARCH11A6NNE9 402 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 C9JQL5 133 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 J3QR06 171 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 ARG1P05089 322 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 GNG10P50151 68 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 SERF2P84101 59 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 RUNX1Q01196 453 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 FAM74A3Q4VXF1 159 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 CT45A1Q5HYN5 189 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 IL17RELQ6ZVW7 336 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 CT45A3Q8NHU0 189 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
LIMS1-204ENST00000409441 ABHD14AQ9BUJ0 271 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 EIF5A2Q9GZV4 153 aaKnown RBP10.84□□□□□ -0.67
LIMS1-204ENST00000409441 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 TIMM9Q9Y5J7 89 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 TRAV1-1A0A0B4J248 108 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 M0R1X1 148 aa10.84□□□□□ -0.67
LIMS1-204ENST00000409441 PROP1O75360 226 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms