RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 FNDC4Q9H6D8 234 aaPredicted RBP14.98□□□□□ -0.01
SMPD4-202ENST00000409031 A0A1B0GWJ7 208 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 PLPPR1Q8TBJ4 325 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 MS4A5Q9H3V2 200 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 RTTNQ86VV8 2226 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 COX6CP09669 75 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 FOXL2P58012 376 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 SPSB3Q6PJ21 355 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 PCSK4Q6UW60 755 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 OR4X2Q8NGF9 303 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 RND1Q92730 232 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 PGPEP1LA6NFU8 196 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 ITGB1BP1O14713 200 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 KRTCAP3Q53RY4 240 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 ZNF716A6NP11 495 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 APOHP02749 345 aaPredicted RBP14.97□□□□□ -0.01
SMPD4-202ENST00000409031 SLC22A18ASQ8N1D0 253 aa14.97□□□□□ -0.01
SMPD4-202ENST00000409031 IGHV1-69-2A0A0G2JMI3 117 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 C2CD4DB7Z1M9 353 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 SYNGR3O43761 229 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 RPP25LQ8N5L8 163 aaKnown RBP14.96□□□□□ -0.01
SMPD4-202ENST00000409031 VCX2Q9H322 139 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 PRRG2O14669 202 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 CA1P00915 261 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-202ENST00000409031 SPANXN1Q5VSR9 72 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 C1orf53Q5VUE5 145 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 DNM1P46Q6ZS02 220 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 TMEM171Q8WVE6 324 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 ELOVL5Q9NYP7 299 aa14.96□□□□□ -0.01
SMPD4-202ENST00000409031 POLR3KQ9Y2Y1 108 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-202ENST00000409031 STPG1Q5TH74 334 aa14.96□□□□□ -0.02
SMPD4-202ENST00000409031 RNASE7Q9H1E1 156 aaKnown RBP14.96□□□□□ -0.02
SMPD4-202ENST00000409031 MS4A6AQ9H2W1 248 aa14.96□□□□□ -0.02
SMPD4-202ENST00000409031 R4GN57 208 aa14.96□□□□□ -0.02
SMPD4-202ENST00000409031 PEX7O00628 323 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 OR5P3Q8WZ94 311 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 DOCK4Q8N1I0 1966 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 SCN8AQ9UQD0 1980 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 RPL27AP46776 148 aaKnown RBP14.95□□□□□ -0.02
SMPD4-202ENST00000409031 SGK494Q96LW2 274 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 ZNF576Q9H609 170 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 WDR83OSQ9Y284 106 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 A0A1B0GUT8 65 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 MAGEA5P43359 124 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 OR1N2Q8NGR9 330 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 ZNF319Q9P2F9 582 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 TRAV17A0A0B4J275 112 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 HIGD1CA8MV81 97 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 UCP2P55851 309 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 QRFPP83859 136 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 ZNF831Q5JPB2 1677 aa14.95□□□□□ -0.02
SMPD4-202ENST00000409031 GPR6P46095 362 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-202ENST00000409031 VOPP1Q96AW1 172 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 C17orf98A8MV24 154 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 OR11H12B2RN74 326 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 PFN1P07737 140 aaKnown RBP14.94□□□□□ -0.02
SMPD4-202ENST00000409031 CEACAM3P40198 252 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 NMSQ5H8A3 153 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 OR11H1Q8NG94 326 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 OR11H2Q8NH07 326 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 CHRNA10Q9GZZ6 450 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 RPP21Q9H633 154 aaKnown RBP14.94□□□□□ -0.02
SMPD4-202ENST00000409031 NPSP0C0P6 89 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 AHCTF1Q8WYP5 2266 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 TSPOP30536 169 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 GNB2P62879 340 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 CCL17Q92583 94 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 COX11Q9Y6N1 276 aa14.94□□□□□ -0.02
SMPD4-202ENST00000409031 IGKV3D-11A0A0A0MRZ8 115 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 A0A1B0GW15 77 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 PLXNA1Q9UIW2 1896 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 CD55P08174 381 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 IGFBP2P18065 325 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 RBPMS2Q6ZRY4 209 aaKnown RBP14.93□□□□□ -0.02
SMPD4-202ENST00000409031 ZNF714Q96N38 554 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 AKIRIN1Q9H9L7 192 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-202ENST00000409031 CALYQ9NYX4 217 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 SLC25A10Q9UBX3 287 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-202ENST00000409031 MRPS16Q9Y3D3 137 aaKnown RBP14.93□□□□□ -0.02
SMPD4-202ENST00000409031 INSIG2Q9Y5U4 225 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 RFNGQ9Y644 331 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 LCTP09848 1927 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 ZNF826PQ6ZT77 177 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 DIRC2Q96SL1 478 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 PLXNB2O15031 1838 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 C12orf77C9JDV5 145 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 TNFSF15O95150 251 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 MC5RP33032 325 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 RSPO4Q2I0M5 234 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-202ENST00000409031 C2orf83Q53S99 150 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 VKORC1L1Q8N0U8 176 aa14.93□□□□□ -0.02
SMPD4-202ENST00000409031 CEP290O15078 2479 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 NRXN2Q9P2S2 1712 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 LYZL4Q96KX0 146 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 HILPDAQ9Y5L2 63 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 PATJQ8NI35 1801 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 GREB1Q4ZG55 1949 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 GPX1P07203 203 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 C3orf79P0CE67 100 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 TIMM23BQ5SRD1 257 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms