RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 LINC01551Q86U37 167 aa12.53□□□□□ -0.4
ATG4B-206ENST00000405546 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
ATG4B-206ENST00000405546 M0QZ24 198 aa12.53□□□□□ -0.4
ATG4B-206ENST00000405546 M0QZK8 103 aa12.53□□□□□ -0.4
ATG4B-206ENST00000405546 SS18L1O75177 396 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-206ENST00000405546 LINC00310P59036 64 aa12.53□□□□□ -0.4
ATG4B-206ENST00000405546 LCN12Q6JVE5 192 aa12.53□□□□□ -0.4
ATG4B-206ENST00000405546 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-206ENST00000405546 PIGBOS1A0A0B4J2F0 54 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 MDFIC2A0A1B0GVS7 189 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 DIRC3C9JPN6 131 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 CECR9P0C854 216 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 HLA-DRB5Q30154 266 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 Q6ZT83 130 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 LSM10Q969L4 123 aaKnown RBP12.52□□□□□ -0.4
ATG4B-206ENST00000405546 SLC35E1Q96K37 410 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.4
ATG4B-206ENST00000405546 ODAMA1E959 279 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 SPRY3O43610 288 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 INO80CQ6PI98 192 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-206ENST00000405546 LEAP2Q969E1 77 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 ANAPC16Q96DE5 110 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.41
ATG4B-206ENST00000405546 OOEPA6NGQ2 149 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 SPINT2O43291 252 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 LINC00614P0C842 121 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 AMTP48728 403 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 GP6Q9HCN6 339 aa12.52□□□□□ -0.41
ATG4B-206ENST00000405546 M0R1B8 84 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 NDUFB8O95169 186 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 SERF2P84101 59 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 FAM201AQ5SY85 155 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 CXXC4Q9H2H0 198 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 F6UZH7 168 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 WNT2P09544 360 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 GPR12P47775 334 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 HNRNPA3P51991 378 aaKnown RBP12.51□□□□□ -0.41
ATG4B-206ENST00000405546 ZNF146Q15072 292 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 KRTCAP3Q53RY4 240 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 SIGLECL1Q8N7X8 197 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 STARD4Q96DR4 205 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 HEYLQ9NQ87 328 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-206ENST00000405546 DMXL1Q9Y485 3027 aa12.51□□□□□ -0.41
ATG4B-206ENST00000405546 TRBV6-6A0A0A6YYG2 114 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 CTXND1A0A1B0GTU2 59 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 SCO2A0A1W2PP80 73 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 SLC25A6P12236 298 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 SMIM21Q3B7S5 101 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 Q6ZR03 302 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 ZNRF1Q8ND25 227 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 SARAFQ96BY9 339 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 ELOVL5Q9NYP7 299 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 KIR2DL2P43627 348 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-206ENST00000405546 ERVK11-1P61568 191 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 SUMO1P63165 101 aaKnown RBP12.5□□□□□ -0.41
ATG4B-206ENST00000405546 PRAMEF5Q5TYX0 476 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 PINX1Q96BK5 328 aaKnown RBP12.5□□□□□ -0.41
ATG4B-206ENST00000405546 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 IQCF6A8MYZ5 107 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-206ENST00000405546 M0R1X1 148 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 FXYD3Q14802 87 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 WDR82Q6UXN9 313 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 ACP7Q6ZNF0 438 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 COQ2Q96H96 371 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
ATG4B-206ENST00000405546 CLDN14O95500 239 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 SRP14P37108 136 aaKnown RBP12.49□□□□□ -0.41
ATG4B-206ENST00000405546 C22orf15Q8WYQ4 148 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 SFRP2Q96HF1 295 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 UHRF2Q96PU4 802 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
ATG4B-206ENST00000405546 TNRC6BQ9UPQ9 1833 aaKnown RBP12.49□□□□□ -0.41
ATG4B-206ENST00000405546 LRRC30A6NM36 301 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 TMEM250H0YL14 139 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 PRDX2P32119 198 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-206ENST00000405546 RBX1P62877 108 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 GAGE1Q13065 139 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 OCC1Q8TAD7 63 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-206ENST00000405546 ABCA1O95477 2261 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 TRAV17A0A0B4J275 112 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 WT1P19544 449 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-206ENST00000405546 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 RCHY1Q96PM5 261 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 APC2O95996 2303 aa12.49□□□□□ -0.41
ATG4B-206ENST00000405546 LINC00473A8K010 186 aa12.48□□□□□ -0.41
ATG4B-206ENST00000405546 ANKRD39Q53RE8 183 aa12.48□□□□□ -0.41
ATG4B-206ENST00000405546 OR8I2Q8N0Y5 310 aa12.48□□□□□ -0.41
ATG4B-206ENST00000405546 OR4A16Q8NH70 328 aa12.48□□□□□ -0.41
ATG4B-206ENST00000405546 MBNL3Q9NUK0 354 aaKnown RBP12.48□□□□□ -0.41
ATG4B-206ENST00000405546 A0A1W2PPV4 95 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms