RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 PAXXQ9BUH6 204 aa6.23□□□□□ -1.41
HDAC9-202ENST00000405010 TMEM140Q9NV12 185 aa6.23□□□□□ -1.41
HDAC9-202ENST00000405010 FOXI3A8MTJ6 420 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-202ENST00000405010 VSTM5A8MXK1 200 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 C12orf77C9JDV5 145 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 CORTO00230 105 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 SNAI2O43623 268 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 TMEM11P17152 192 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 PCSK4Q6UW60 755 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 TEX43Q6ZNM6 134 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 ZNF826PQ6ZT77 177 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 OR2Z1Q8NG97 314 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 SLC25A40Q8TBP6 338 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 YPEL4Q96NS1 127 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 PRNDQ9UKY0 176 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 NKX6-3A6NJ46 265 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 IGLC2P0DOY2 106 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 IGLC3P0DOY3 106 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 PI4KAP42356 2102 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 GPR6P46095 362 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-202ENST00000405010 PRSS8Q16651 343 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 AMMECR1LQ6DCA0 310 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 MDP1Q86V88 176 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 FADS6Q8N9I5 356 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 PLPPR1Q8TBJ4 325 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 ADTRPQ96IZ2 230 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 SGK494Q96LW2 274 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 CRISPLD2Q9H0B8 497 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 MEGF9Q9H1U4 602 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 HEATR1Q9H583 2144 aaKnown RBP6.22□□□□□ -1.41
HDAC9-202ENST00000405010 FSCN3Q9NQT6 498 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 CLEC1BQ9P126 229 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 IGLV3-32A0A0A0MS00 114 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 RIPPLY3P57055 190 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 C3AR1Q16581 482 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 SRSF7Q16629 238 aaKnown RBP eCLIP6.22□□□□□ -1.41
HDAC9-202ENST00000405010 ALKBH6Q3KRA9 238 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 TMEM42Q69YG0 159 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 SPINK14Q6IE38 97 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 ASCL4Q6XD76 172 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 FGFBP3Q8TAT2 258 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 CXXC4Q9H2H0 198 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 OSTCQ9NRP0 149 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 DOCK10Q96BY6 2186 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 FRMPD3Q5JV73 1810 aa6.22□□□□□ -1.41
HDAC9-202ENST00000405010 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.21□□□□□ -1.41
HDAC9-202ENST00000405010 IGHV1-69-2A0A0G2JMI3 117 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 LYZL6O75951 148 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 STAG3L2P0CL84 134 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 STAG3L3P0CL85 134 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 FABP2P12104 132 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 SSTR5P35346 364 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 PDLIM4P50479 330 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 TDRG1Q3Y452 100 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 H1FXQ92522 213 aaKnown RBP6.21□□□□□ -1.41
HDAC9-202ENST00000405010 CHODLQ9H9P2 273 aa6.21□□□□□ -1.41
HDAC9-202ENST00000405010 TRAV30A0A087WSZ9 112 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 IGKV1-6A0A0C4DH72 117 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 IZUMO1RA6ND01 250 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 TMPRSS2O15393 492 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 MT-CO3P00414 261 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 PLAUP00749 431 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 LIPFP07098 398 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 NMUP48645 174 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 HSPE1P61604 102 aaKnown RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 MPV17L2Q567V2 206 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 Q6ZS49 121 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 S100A7AQ86SG5 101 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 ZIC4Q8N9L1 334 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 PGLYRP4Q96LB8 373 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 OR51B2Q9Y5P1 312 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 IGHV5-10-1A0A0J9YXX1 117 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 PPIAL4DF5H284 164 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 C3orf80F5H4A9 247 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 RBFOX2O43251 390 aaKnown RBP eCLIP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 NUPR1O60356 82 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 CA1P00915 261 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 IGFBP2P18065 325 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 YPEL3P61236 119 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 RPL8P62917 257 aaKnown RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 Q0VG73 95 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 RIGQ13278 110 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 C6orf15Q6UXA7 325 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 OR1B1Q8NGR6 318 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 FLYWCH2Q96CP2 140 aaKnown RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 COL25A1Q9BXS0 654 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 WDR54Q9H977 334 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 CLEC5AQ9NY25 188 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 KLF13Q9Y2Y9 288 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-202ENST00000405010 PCNTO95613 3336 aa6.21□□□□□ -1.42
HDAC9-202ENST00000405010 LINC00271P0C7V0 271 aa6.2□□□□□ -1.42
HDAC9-202ENST00000405010 SRFP11831 508 aa6.2□□□□□ -1.42
HDAC9-202ENST00000405010 CA7P43166 264 aa6.2□□□□□ -1.42
HDAC9-202ENST00000405010 ARF6P62330 175 aa6.2□□□□□ -1.42
HDAC9-202ENST00000405010 TPTE2P1Q5T6R2 138 aa6.2□□□□□ -1.42
HDAC9-202ENST00000405010 HAPLN4Q86UW8 402 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms