RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 OR51B2Q9Y5P1 312 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 SOX21Q9Y651 276 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 IGHV1-69DA0A0B4J2H0 117 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 UPK2O00526 184 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 MED6O75586 246 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 KBTBD11O94819 623 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 IGLV2-23P01705 113 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 IGHV1-69P01742 117 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 SNRNP70P08621 437 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 METTL15P1P0C7V9 234 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 APELAP0DMC3 54 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 LYL1P12980 280 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 P2RY1P47900 373 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 ARHGDIBP52566 201 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 F2RL1P55085 397 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 RPL8P62917 257 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 ZNF345Q14585 488 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 OR8G2PQ6IF36 304 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 KCNRGQ8N5I3 272 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 VSTM2AQ8TAG5 236 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 MALSU1Q96EH3 234 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 BSCL2Q96G97 398 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 AQP10Q96PS8 301 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 ENY2Q9NPA8 101 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 LYRM2Q9NU23 88 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 METTL1Q9UBP6 276 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 PRNDQ9UKY0 176 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 TBL2Q9Y4P3 447 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 HIVEP2P31629 2446 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 A0A0U1RQK1 487 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 IGSF23A1L1A6 192 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 FAM90A9PA6NNJ1 464 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 FAM90A26D6RGX4 464 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 GPR137BO60478 399 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 MOSP00540 346 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 IFNA10P01566 189 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 GATA3P23771 443 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 CD1BP29016 333 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 PAX9P55771 341 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 SPCS3P61009 180 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 HSPE1P61604 102 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 IFITM2Q01629 132 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 EWSR1Q01844 656 aaKnown RBP eCLIP2.98□□□□□ -1.932e-7■■■□□ 18.2
RTN4-208ENST00000404909 PSG5Q15238 335 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 POU2AF1Q16633 256 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 FBLN7Q53RD9 439 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 C10orf55Q5SWW7 151 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 FAM120AOSQ5T036 256 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 STX12Q86Y82 276 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 PUSL1Q8N0Z8 303 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 TMEM252Q8N6L7 170 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 CFHR4Q92496 578 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 EAF1Q96JC9 268 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 TSNAXQ99598 290 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 HIPK2Q9H2X6 1198 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 ZNF430Q9H8G1 570 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 TMEM14BQ9NUH8 114 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 BET1LQ9NYM9 111 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 FBXL17Q9UF56 701 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 TCF19Q9Y242 345 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 WSB1Q9Y6I7 421 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 BCL2L11O43521 198 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 FAM106CPP0CH98 169 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 TMEM11P17152 192 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 BRS3P32247 399 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 TNXAQ16473 311 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 CYB5R2Q6BCY4 276 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 ZNF429Q86V71 674 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 OR10W1Q8NGF6 305 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 OR5C1Q8NGR4 320 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 OR2T10Q8NGZ9 312 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 AJUBAQ96IF1 538 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 CIB3Q96Q77 187 aaPredicted RBP2.97□□□□□ -1.93
RTN4-208ENST00000404909 GON7Q9BXV9 100 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 SLC25A31Q9H0C2 315 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 PLEKHA3Q9HB20 300 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 KIAA1456Q9P272 454 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 FOXA2Q9Y261 457 aaPredicted RBP2.97□□□□□ -1.93
RTN4-208ENST00000404909 OTOGQ6ZRI0 2925 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 CR1P17927 2039 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 TET2Q6N021 2002 aaPredicted RBP2.97□□□□□ -1.93
RTN4-208ENST00000404909 TEX50A0A1B0GTY4 177 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 OOSP1A8MZH6 123 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 E7EUB6 86 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 FCN1O00602 326 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 NBR2O15453 112 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 CNIH1O95406 144 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 CFDP00746 253 aaPredicted RBP2.97□□□□□ -1.93
RTN4-208ENST00000404909 FGF2P09038 288 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 KLF17Q5JT82 389 aaPredicted RBP2.97□□□□□ -1.93
RTN4-208ENST00000404909 RPL7L1Q6DKI1 246 aaKnown RBP2.97□□□□□ -1.93
RTN4-208ENST00000404909 ALKAL2Q6UX46 152 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 PPP1R27Q86WC6 154 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 SMIM8Q96KF7 97 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 C11orf1Q9H5F2 150 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 FKBP11Q9NYL4 201 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 SIGLEC9Q9Y336 463 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 STRAPQ9Y3F4 350 aaKnown RBP2.97□□□□□ -1.93
RTN4-208ENST00000404909 RRHO14718 337 aa2.97□□□□□ -1.93
RTN4-208ENST00000404909 IFNA4P05014 189 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms