RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CCDC122Q5T0U0 273 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 HIST2H3PS2Q5TEC6 136 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 DCXRQ7Z4W1 244 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 PPP1R14BQ96C90 147 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 IMP4Q96G21 291 aaKnown RBP0.98□□□□□ -2.25
CD47-203ENST00000398258 CNBD2Q96M20 576 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 OR52E6Q96RD3 313 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 IMMP2LQ96T52 175 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 AMMECR1Q9Y4X0 333 aaPredicted RBP0.98□□□□□ -2.25
CD47-203ENST00000398258 LSM5Q9Y4Y9 91 aaKnown RBP0.98□□□□□ -2.25
CD47-203ENST00000398258 SIPA1L1O43166 1804 aa0.98□□□□□ -2.25
CD47-203ENST00000398258 IGHV1-18A0A0C4DH31 117 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 TMEM269A0A1B0GVZ9 245 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 SMIM23A6NLE4 172 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 EEF1E1-BLOC1S5C9J1V9 151 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 J3QQQ9 107 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 LEPROTO15243 131 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 E2F6O75461 281 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 C1QCP02747 245 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 PRB1P04280 392 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 CCR2P41597 374 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 RPL28P46779 137 aaKnown RBP0.97□□□□□ -2.25
CD47-203ENST00000398258 OR4D2P58180 307 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 RAB14P61106 215 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 RPL26P61254 145 aaKnown RBP0.97□□□□□ -2.25
CD47-203ENST00000398258 RPL30P62888 115 aaKnown RBP0.97□□□□□ -2.25
CD47-203ENST00000398258 ERHP84090 104 aaKnown RBP0.97□□□□□ -2.25
CD47-203ENST00000398258 IFITM2Q01629 132 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 GLT8D1Q68CQ7 371 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 TMEM42Q69YG0 159 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 RPP25LQ8N5L8 163 aaKnown RBP0.97□□□□□ -2.25
CD47-203ENST00000398258 ZNF565Q8N9K5 539 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 OR51T1Q8NGJ9 327 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 OR2T4Q8NH00 348 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 SLC7A6Q92536 515 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 KLK6Q92876 244 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 ITFG2Q969R8 447 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 OR8D2Q9GZM6 311 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 CHST6Q9GZX3 395 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 UCK1Q9HA47 277 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 RPL26L1Q9UNX3 145 aaKnown RBP0.97□□□□□ -2.25
CD47-203ENST00000398258 SCAF11Q99590 1463 aaKnown RBP0.97□□□□□ -2.25
CD47-203ENST00000398258 SMARCA4P51532 1647 aa0.97□□□□□ -2.25
CD47-203ENST00000398258 DOCK10Q96BY6 2186 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 H7C2G1 150 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 KLRC4O43908 158 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 SERPINA7P05543 415 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 S100A6P06703 90 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 MSMBP08118 114 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 TFPTP0C1Z6 253 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 KCNE1P15382 129 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 EVX1P49640 407 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 SULT1A1P50225 295 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 RAB13P51153 203 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 HIST1H4AP62805 103 aaKnown RBP0.96□□□□□ -2.26
CD47-203ENST00000398258 CCL20P78556 96 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 GUK1Q16774 197 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 TBC1D19Q8N5T2 526 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 ANKRD7Q92527 254 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 CCDC42Q96M95 316 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 FAM96AQ9H5X1 160 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 TIMM9Q9Y5J7 89 aa0.96□□□□□ -2.26
CD47-203ENST00000398258 KIAA2026Q5HYC2 2103 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 GBF1Q92538 1859 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 FN1P02751 2386 aaKnown RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 A0A0J9YY10 115 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 A0A1B0GVG6 124 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 A0A1B0GX78 115 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 OR51F1A6NGY5 319 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 ZNF860A6NHJ4 632 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 RFPL4AA6NLU0 287 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 RFPL4AL1F8VTS6 287 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 H3BT86 120 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 I3L521 148 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 KPNA3O00505 521 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 CHP2O43745 196 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 CREBL2O60519 120 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 NOS1APO75052 506 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 PGLYRP1O75594 196 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 CIAO1O76071 339 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 HIST1H1TP22492 207 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 S100A7P31151 101 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 ANP32AP39687 249 aaKnown RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 CSN1S1P47710 185 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 CEBPGP53567 150 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 SPCS3P61009 180 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 ACOT6Q3I5F7 207 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 IBA57Q5T440 356 aaKnown RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 KTN1-AS1Q86SY8 53 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 TRAPPC5Q8IUR0 188 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 C20orf196Q8IYI0 205 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 LRRC25Q8N386 305 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 OR5B17Q8NGF7 314 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 ZNF625Q96I27 306 aaPredicted RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 PPP1R2P1Q96PQ5 205 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 HSPB9Q9BQS6 159 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 DOHHQ9BU89 302 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 OR51V1Q9H2C8 321 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 CISHQ9NSE2 258 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 CMTM6Q9NX76 183 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms