RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ACY3Q96HD9 319 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 TMEM101Q96IK0 257 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 FBXL7Q9UJT9 491 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 TP53TG1Q9Y2A0 90 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 CNTRLQ7Z7A1 2325 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 C7orf71A4D174 169 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 TIAF1O95411 115 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 SPINK8P0C7L1 97 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 FAM106CPP0CH98 169 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 MAGEA5P43359 124 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 CLDN15P56746 228 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 EWSR1Q01844 656 aaKnown RBP eCLIP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 LY6DQ14210 128 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF260Q3ZCT1 412 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 FAM106AQ4KMX7 169 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 PRR31Q5SQ13 230 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 Q6ZN92 141 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 OR5A1Q8NGJ0 315 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 IL17DQ8TAD2 202 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 WDR13Q9H1Z4 485 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 KCNIP1Q9NZI2 227 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 R4GN57 208 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 KNTC1P50748 2209 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 A0A0B4J2A0 478 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 PRKNO60260 465 aaPredicted RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 SP9P0CG40 484 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 CDAP32320 146 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 CD164L2Q6UWJ8 174 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 FAM19A1Q7Z5A9 133 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 MARCH3Q86UD3 253 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 KLHDC1Q8N7A1 406 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 OR10G7Q8NGN6 311 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 FGF14Q92915 247 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 RPP25Q9BUL9 199 aaKnown RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 SHPKQ9UHJ6 478 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 SOX21Q9Y651 276 aaPredicted RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 RP1L1Q8IWN7 2480 aaPredicted RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 KBTBD11O94819 623 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 IGHMP01871 453 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 APOBEC1P41238 236 aaKnown RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 RPL31P62899 125 aaKnown RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 ARFRP1Q13795 201 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 UFSP1Q6NVU6 142 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 OR5H2Q8NGV7 314 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 TMED6Q8WW62 240 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 SH2D2AQ9NP31 389 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 RCL1Q9Y2P8 373 aaKnown RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 BOD1L1Q8NFC6 3051 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 hADV38S2A0JD32 116 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 TAAR5O14804 337 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 MLNRO43193 412 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 TRGC2P03986 189 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 AMY1AP04745 511 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 PPIFP30405 207 aaKnown RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 G6PCP35575 357 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 NKX2-1P43699 371 aaPredicted RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 HINT1P49773 126 aaPredicted RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 MEOX1P50221 254 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 PRDX4Q13162 271 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 DMRTC1Q5HYR2 192 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 PPP1R32Q7Z5V6 425 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 SYT8Q8NBV8 401 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 OR2K2Q8NGT1 345 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 OR2AJ1Q8NGZ0 328 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 FRZBQ92765 325 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 MUCL1Q96DR8 90 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC25A39Q9BZJ4 359 aaPredicted RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 C1orf123Q9NWV4 160 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 KLHL13Q9P2N7 655 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 PKIGQ9Y2B9 76 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 ACACBO00763 2458 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 RP1P56715 2156 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 GCN1Q92616 2671 aaKnown RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 SPTY2D1-AS1A0A0U1RR47 76 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 IGLC7A0M8Q6 106 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 F8VVB4 439 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 F8VWA3 439 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF93P35789 620 aaPredicted RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 CLDN6P56747 220 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 TNFAIP6P98066 277 aaPredicted RBP5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 KLRB1Q12918 225 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 RASL11AQ6T310 242 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 TTC9CQ8N5M4 171 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 OR8B12Q8NGG6 310 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 SLAMF6Q96DU3 332 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 OR2H1Q9GZK4 316 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 NPFFR1Q9GZQ6 430 aa5.53□□□□□ -1.52
TM9SF4-202ENST00000398022 TDRD6O60522 2096 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 TLCD2A6NGC4 264 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 TAX1BP3O14907 124 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 HSPE1P61604 102 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 RPS23P62266 143 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 PSG9Q00887 426 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 ENDOGQ14249 297 aaKnown RBP5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 OR7A5Q15622 319 aa5.52□□□□□ -1.53
TM9SF4-202ENST00000398022 HIST2H2BCQ6DN03 193 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms