RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 C1QBP02746 253 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 FGF2P09038 288 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 SRP14P37108 136 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 FAM71E2Q8N5Q1 922 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 ZNF48Q96MX3 618 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 FBXL15Q9H469 300 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 PRDM13Q9H4Q3 707 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 METTL1Q9UBP6 276 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 HSPB7Q9UBY9 170 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 FOXA2Q9Y261 457 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 RCL1Q9Y2P8 373 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 POMT1Q9Y6A1 747 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 PLXNB1O43157 2135 aa13.49□□□□□ -0.25
TSPAN4-205ENST00000397406 H0YIZ8 118 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 H3BUX3 64 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 S100A10P60903 97 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 FGL1Q08830 312 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 OR11H4Q8NGC9 324 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 OR8H1Q8NGG4 311 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 PPP1R14BQ96C90 147 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 ZNF430Q9H8G1 570 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 PRNDQ9UKY0 176 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 TCF19Q9Y242 345 aa13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 LSM5Q9Y4Y9 91 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-205ENST00000397406 A6NDX4 124 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 BOLA2-SMG1P6H3BVE0 249 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 RBMXL2O75526 392 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 MYOD1P15172 320 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 RPL8P62917 257 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 PJVKQ0ZLH3 352 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 PRSS8Q16651 343 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 PDLIM3Q53GG5 364 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 C11orf87Q6NUJ2 197 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 Q6YL49 198 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 PPP1R27Q86WC6 154 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 RNF126Q9BV68 326 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 ZFP57Q9NU63 452 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 OR5AC2Q9NZP5 309 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 KIAA1456Q9P272 454 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 DEDDO75618 318 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 LYL1P12980 280 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 IER3P46695 156 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 C5orf64Q2M2E5 130 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 ZFP69Q49AA0 526 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 PRSS54Q6PEW0 395 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 MMD2Q8IY49 270 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 Q8N9W7 124 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 RBM14Q96PK6 669 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 C11orf1Q9H5F2 150 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 MBD2Q9UBB5 411 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 ZNF257Q9Y2Q1 563 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
TSPAN4-205ENST00000397406 NCBP2LA6PVI3 153 aaKnown RBP13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 FCN1O00602 326 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 TCF21O43680 179 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 SYNGR2O43760 224 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 IGHV4-59P01825 116 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 PET100P0DJ07 73 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 SLC25A4P12235 298 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 SPCS3P61009 180 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 HSPE1P61604 102 aaKnown RBP13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 SSBP2P81877 361 aaPredicted RBP13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 TMEM219Q86XT9 240 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 CLCC1Q96S66 551 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 RBKSQ9H477 322 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 FKBP11Q9NYL4 201 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 C1RLQ9NZP8 487 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 CACFD1Q9UGQ2 172 aa13.46□□□□□ -0.26
TSPAN4-205ENST00000397406 TEX50A0A1B0GTY4 177 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 OR2F2O95006 317 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 IFNA17P01571 189 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 MAS1LP35410 378 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 PLGLAQ15195 96 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 LY6EQ16553 131 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 OR5B3Q8NH48 314 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 THAP6Q8TBB0 222 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
TSPAN4-205ENST00000397406 CGB1A6NKQ9 187 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 WRBO00258 174 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 CHST1O43916 411 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 SSSCA1O60232 199 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 MED6O75586 246 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 TMEM50AO95807 157 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 RLN2P04090 185 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 HNRNPCP07910 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 PRCDQ00LT1 54 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 SPINK9Q5DT21 86 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 NOXA1Q86UR1 476 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 PITPNC1Q9UKF7 332 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 MOB4Q9Y3A3 225 aa13.44□□□□□ -0.26
TSPAN4-205ENST00000397406 FXYD6-FXYD2A0A087WZ82 144 aa13.43□□□□□ -0.26
TSPAN4-205ENST00000397406 A0A1B0GW64 132 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms