RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ZNF616Q08AN1 781 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 RPL39P5Q59GN2 51 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-207ENST00000397200 ABHD12Q8N2K0 398 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 SVBPQ8N300 66 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 PNKDQ8N490 385 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 TNFRSF14Q92956 283 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 CLEC7AQ9BXN2 247 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 TMEM231Q9H6L2 316 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 RFNGQ9Y644 331 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 SAA2-SAA4A0A096LPE2 208 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 IGHV2-26A0A0B4J1V2 119 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 F8W036 122 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 CD5LO43866 347 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 FCGR3BO75015 233 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 LY86O95711 162 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 IFNA5P01569 189 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 PRH1P02810 166 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 SAA2P0DJI9 122 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-207ENST00000397200 THBS3P49746 956 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 KLRD1Q13241 179 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 SLC25A48Q6ZT89 311 aaKnown RBP12.07□□□□□ -0.48
CAPN3-207ENST00000397200 OR9G1Q8NH87 305 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 FAM213BQ8TBF2 198 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 LHX4Q969G2 390 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 ADTRPQ96IZ2 230 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-207ENST00000397200 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 NKX6-2Q9C056 277 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-207ENST00000397200 PRELID3BQ9Y3B1 194 aa12.07□□□□□ -0.48
CAPN3-207ENST00000397200 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 TEX15Q9BXT5 2789 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 A0A1W2PPE3 182 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 C9JQL5 133 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 SCAF4O95104 1147 aaKnown RBP12.06□□□□□ -0.48
CAPN3-207ENST00000397200 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 DEFA5Q01523 94 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 POU2AF1Q16633 256 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 LRRC75BQ2VPJ9 315 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 SPANXN5Q5MJ07 72 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 PUSL1Q8N0Z8 303 aaKnown RBP12.06□□□□□ -0.48
CAPN3-207ENST00000397200 C8orf31Q8N9H6 132 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 DTD1Q8TEA8 209 aa12.06□□□□□ -0.48
CAPN3-207ENST00000397200 TMA7Q9Y2S6 64 aaKnown RBP12.06□□□□□ -0.48
CAPN3-207ENST00000397200 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-207ENST00000397200 J3QR06 171 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 DNASE2O00115 360 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-207ENST00000397200 AGPAT2O15120 278 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 CD99P14209 185 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 NQO2P16083 231 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 PRRX1P54821 245 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 KRTAP1-1Q07627 177 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 SLC38A11Q08AI6 406 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 BTN1A1Q13410 526 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 GUK1Q16774 197 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 HCP5Q6MZN7 132 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 CENPVQ7Z7K6 275 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-207ENST00000397200 ZNF596Q8TC21 504 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 S1PR3Q99500 378 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 TMUB1Q9BVT8 246 aa12.05□□□□□ -0.48
CAPN3-207ENST00000397200 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
CAPN3-207ENST00000397200 ARG1P05089 322 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 FOSL1P15407 271 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 UBE2E1P51965 193 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 VWC2Q2TAL6 325 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 BEND2Q8NDZ0 799 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 OR11H6Q8NGC7 330 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 OR10X1Q8NGY0 326 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 SMDT1Q9H4I9 107 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 TIMM9Q9Y5J7 89 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 TRAV1-1A0A0B4J248 108 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 TRAV40A0A0B4J280 105 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 AVPP01185 164 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 RELBQ01201 579 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 PEA15Q15121 130 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 AKR1C8PQ5T2L2 129 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 ZNF429Q86V71 674 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 LILRB2Q8N423 598 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 ZNF383Q8NA42 475 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 QTRT1Q9BXR0 403 aaKnown RBP12.04□□□□□ -0.48
CAPN3-207ENST00000397200 YAE1D1Q9NRH1 226 aa12.04□□□□□ -0.48
CAPN3-207ENST00000397200 CENPVL3A0A0U1RRI6 287 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 A0A1W2PRD5 423 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 A0A1W2PRF3 423 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 A0A1W2PRM7 423 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 ODF3BA8MYP8 253 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 IGLV1-47P01700 117 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 IL3RAP26951 378 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 SPCS3P61009 180 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 ERVK-16P61578 105 aa12.03□□□□□ -0.48
CAPN3-207ENST00000397200 SERF2P84101 59 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms