RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CFHR4Q92496 578 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 AJUBAQ96IF1 538 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 TSNAXQ99598 290 aaKnown RBP10.59□□□□□ -0.71
SEC13-209ENST00000397117 RNF5Q99942 180 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 PLSCR3Q9NRY6 295 aa10.59□□□□□ -0.71
SEC13-209ENST00000397117 LSM5Q9Y4Y9 91 aaKnown RBP10.59□□□□□ -0.71
SEC13-209ENST00000397117 PITX3O75364 302 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 NXPH3O95157 252 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 MBPP02686 304 aaPredicted RBP10.58□□□□□ -0.72
SEC13-209ENST00000397117 SNRNP70P08621 437 aaKnown RBP10.58□□□□□ -0.72
SEC13-209ENST00000397117 FAM106CPP0CH98 169 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 SAA1P0DJI8 122 aaPredicted RBP10.58□□□□□ -0.72
SEC13-209ENST00000397117 IL15RAQ13261 267 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 SLC7A5P1Q8MH63 180 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 OR2T10Q8NGZ9 312 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 NSG2Q9Y328 171 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 BOLA1Q9Y3E2 137 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 TRAV14DV4A0A0A6YYC5 116 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 A0A0U1RQK1 487 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 WRBO00258 174 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 FBP1P09467 338 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 OR9G9P0C7N8 305 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 MDKP21741 143 aaPredicted RBP10.58□□□□□ -0.72
SEC13-209ENST00000397117 CD24P25063 80 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 OR2B8PP59922 312 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 UBE2KP61086 200 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 HNF4GQ14541 408 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
SEC13-209ENST00000397117 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 RITA1Q96K30 269 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 BET1LQ9NYM9 111 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 CACFD1Q9UGQ2 172 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 SOX21Q9Y651 276 aaPredicted RBP10.58□□□□□ -0.72
SEC13-209ENST00000397117 POMT1Q9Y6A1 747 aa10.58□□□□□ -0.72
SEC13-209ENST00000397117 FAM90A26D6RGX4 464 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 SLC25A17O43808 307 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 KBTBD11O94819 623 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 RELBQ01201 579 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 ID3Q02535 119 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 C9orf139Q6ZV77 190 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 PUSL1Q8N0Z8 303 aaKnown RBP10.57□□□□□ -0.72
SEC13-209ENST00000397117 OR4A5Q8NH83 315 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 GRPEL2Q8TAA5 225 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 EAF1Q96JC9 268 aaPredicted RBP10.57□□□□□ -0.72
SEC13-209ENST00000397117 MAGT1Q9H0U3 335 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 MBD2Q9UBB5 411 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 PRNDQ9UKY0 176 aa10.57□□□□□ -0.72
SEC13-209ENST00000397117 TRAV3A0A0B4J244 114 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 C15orf61A6NNL5 157 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 HMSDA8MTL9 139 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 K7EPK0 472 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 UPK2O00526 184 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 SSSCA1O60232 199 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 MED6O75586 246 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 DEDDO75618 318 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 IFNA17P01571 189 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 SLC25A4P12235 298 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 TMEM11P17152 192 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 PVALBP20472 110 aaPredicted RBP10.56□□□□□ -0.72
SEC13-209ENST00000397117 POLR2GP62487 172 aaKnown RBP eCLIP10.56□□□□□ -0.72
SEC13-209ENST00000397117 PLGLAQ15195 96 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 PSG5Q15238 335 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 MMDQ15546 238 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 PRSS54Q6PEW0 395 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 THNSL2Q86YJ6 484 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 FAM71E2Q8N5Q1 922 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 TEX45Q8NA69 505 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 DCUN1D4Q92564 292 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 QTRT1Q9BXR0 403 aaKnown RBP10.56□□□□□ -0.72
SEC13-209ENST00000397117 MEGF9Q9H1U4 602 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 FKBP11Q9NYL4 201 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 KIAA1456Q9P272 454 aa10.56□□□□□ -0.72
SEC13-209ENST00000397117 RCL1Q9Y2P8 373 aaKnown RBP10.56□□□□□ -0.72
SEC13-209ENST00000397117 L7N2F9 121 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 SPDEFO95238 335 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 CNTFRP26992 372 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 NUP62P37198 522 aaPredicted RBP10.55□□□□□ -0.72
SEC13-209ENST00000397117 VAMP2P63027 116 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 EBI3Q14213 229 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 LGALSLQ3ZCW2 172 aaPredicted RBP10.55□□□□□ -0.72
SEC13-209ENST00000397117 ZNF546Q86UE3 836 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 INO80EQ8NBZ0 244 aaPredicted RBP10.55□□□□□ -0.72
SEC13-209ENST00000397117 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 METTL1Q9UBP6 276 aaKnown RBP10.55□□□□□ -0.72
SEC13-209ENST00000397117 HSPB7Q9UBY9 170 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 FOXA2Q9Y261 457 aaPredicted RBP10.55□□□□□ -0.72
SEC13-209ENST00000397117 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 OR51B2Q9Y5P1 312 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 NCBP2LA6PVI3 153 aaKnown RBP10.55□□□□□ -0.72
SEC13-209ENST00000397117 E5RGE8 158 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 H0YIZ8 118 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 NBR2O15453 112 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 SYNGR2O43760 224 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 CHST1O43916 411 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 IL6RP08887 468 aaPredicted RBP10.55□□□□□ -0.72
SEC13-209ENST00000397117 DYNLT3P51808 116 aa10.55□□□□□ -0.72
SEC13-209ENST00000397117 RPL8P62917 257 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms