RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PROP1O75360 226 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 OR8U9P0C7N5 309 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 PI3P19957 117 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 CNTFRP26992 372 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 PSMB6P28072 239 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 S100A11P31949 105 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 OR2F1Q13607 317 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 PDLIM3Q53GG5 364 aaPredicted RBP11.44□□□□□ -0.58
SEC13-208ENST00000397109 ZNF546Q86UE3 836 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 OR8U1Q8NH10 309 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 THAP6Q8TBB0 222 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 PPP1R1CQ8WVI7 109 aa11.44□□□□□ -0.58
SEC13-208ENST00000397109 TSNAXQ99598 290 aaKnown RBP11.44□□□□□ -0.58
SEC13-208ENST00000397109 DUXBA0A1W2PPF3 345 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 M0R1X1 148 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 IFNA7P01567 189 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 IGHG4P01861 327 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 GNRHRP30968 328 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 LUMP51884 338 aaPredicted RBP11.43□□□□□ -0.58
SEC13-208ENST00000397109 FXYD4P59646 89 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 TAGLNQ01995 201 aaKnown RBP11.43□□□□□ -0.58
SEC13-208ENST00000397109 TMEM187Q14656 261 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 OPCMLQ14982 345 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 PLGLAQ15195 96 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 MSMO1Q15800 293 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 ANKRD55Q3KP44 614 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 KPRPQ5T749 579 aaPredicted RBP11.43□□□□□ -0.58
SEC13-208ENST00000397109 TEX261Q6UWH6 196 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 PDPNQ86YL7 162 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 LGI3Q8N145 548 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 RNF152Q8N8N0 203 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 WDR89Q96FK6 387 aaPredicted RBP11.43□□□□□ -0.58
SEC13-208ENST00000397109 OR2D2Q9H210 308 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 U3KQ87 197 aa11.43□□□□□ -0.58
SEC13-208ENST00000397109 TRAV14DV4A0A0A6YYC5 116 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 IGKV1D-13A0A0B4J2D9 117 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 MPPED1O15442 326 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 SPDEFO95238 335 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 MPC2O95563 127 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 IGKV1-13P0DP09 117 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 LYL1P12980 280 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 RPS16P62249 146 aaKnown RBP11.42□□□□□ -0.58
SEC13-208ENST00000397109 CFHR3Q02985 330 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 IL15RAQ13261 267 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 ACOT7LQ6ZUV0 252 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 ZNF695Q8IW36 515 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 ZNF383Q8NA42 475 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 ZBTB34Q8NCN2 500 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 KLHL30-AS1Q8NEE0 82 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 IL22RA2Q969J5 263 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 MFFQ9GZY8 342 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 FBXL15Q9H469 300 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 SLC35D1Q9NTN3 355 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 SDHAF2Q9NX18 166 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 TMED3Q9Y3Q3 217 aa11.42□□□□□ -0.58
SEC13-208ENST00000397109 C13orf42A0A1B0GVH6 325 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 FAM25EA8MYX2 175 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 ARPC5O15511 151 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 CXCL2P19875 107 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 CDX1P47902 265 aaPredicted RBP11.41□□□□□ -0.58
SEC13-208ENST00000397109 ZNF645Q8N7E2 425 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 BVESQ8NE79 360 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 FLYWCH2Q96CP2 140 aaKnown RBP11.41□□□□□ -0.58
SEC13-208ENST00000397109 SEC22AQ96IW7 307 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 ADTRPQ96IZ2 230 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 SLC5A7Q9GZV3 580 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 PARP11Q9NR21 331 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 TNFSF18Q9UNG2 199 aa11.41□□□□□ -0.58
SEC13-208ENST00000397109 FXYD6-FXYD2A0A087WZ82 144 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 C3orf85A0A1B0GTC6 90 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 ATP6V0E1O15342 81 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 IGLV2-14P01704 120 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 RPLP1P05386 114 aaKnown RBP11.4□□□□□ -0.58
SEC13-208ENST00000397109 RRASP10301 218 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 MYCNOSP40205 109 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 LGALS7P47929 136 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 THBS3P49746 956 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 PSG5Q15238 335 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 TMUB2Q71RG4 321 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 KCNRGQ8N5I3 272 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 INO80EQ8NBZ0 244 aaPredicted RBP11.4□□□□□ -0.58
SEC13-208ENST00000397109 ZNF680Q8NEM1 530 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 GLYATL2Q8WU03 294 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 C5orf30Q96GV9 206 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 RCC1LQ96I51 464 aaKnown RBP11.4□□□□□ -0.58
SEC13-208ENST00000397109 TMEM56Q96MV1 263 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 WSB1Q9Y6I7 421 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 TMEM56-RWDD3S4R434 201 aa11.4□□□□□ -0.58
SEC13-208ENST00000397109 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 CCSO14618 274 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 RLN2P04090 185 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 OR5AC1P0C628 307 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 PSMB8P28062 276 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 PPIFP30405 207 aaKnown RBP11.39□□□□□ -0.59
SEC13-208ENST00000397109 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms