RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 HOGA1Q86XE5 327 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 CMTM1Q8IZ96 169 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 UXS1Q8NBZ7 420 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 S100A16Q96FQ6 103 aaKnown RBP12.38□□□□□ -0.43
DDR1-229ENST00000396342 THAP7Q9BT49 309 aaPredicted RBP12.38□□□□□ -0.43
DDR1-229ENST00000396342 HIPK2Q9H2X6 1198 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 CCL28Q9NRJ3 127 aa12.38□□□□□ -0.43
DDR1-229ENST00000396342 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 ZNF785A8K8V0 405 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 SULT1C2O00338 296 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
DDR1-229ENST00000396342 SNAPC5O75971 98 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 NDUFB8O95169 186 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 CLEC3BP05452 202 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 IL6RP08887 468 aaPredicted RBP12.37□□□□□ -0.43
DDR1-229ENST00000396342 CD7P09564 240 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 AREGP15514 252 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 LAMTOR1Q6IAA8 161 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 NR2C2APQ86WQ0 139 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 TMEM17Q86X19 198 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 WDR89Q96FK6 387 aaPredicted RBP12.37□□□□□ -0.43
DDR1-229ENST00000396342 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 ZC4H2Q9NQZ6 224 aa12.37□□□□□ -0.43
DDR1-229ENST00000396342 SSX5O60225 188 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 REG1AP05451 166 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 CTRB1P17538 263 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 ZNF773Q6PK81 442 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 OR1L6Q8NGR2 347 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 FAM110AQ9BQ89 295 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
DDR1-229ENST00000396342 MRPL27Q9P0M9 148 aaKnown RBP12.36□□□□□ -0.43
DDR1-229ENST00000396342 S4R3C0 116 aa12.36□□□□□ -0.43
DDR1-229ENST00000396342 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
DDR1-229ENST00000396342 A8MWP6 167 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
DDR1-229ENST00000396342 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 GPR183P32249 361 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 APOC4P55056 127 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 ELLP55199 621 aaPredicted RBP12.35□□□□□ -0.43
DDR1-229ENST00000396342 GIMAP1Q8WWP7 306 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 HINT2Q9BX68 163 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 C6orf62Q9GZU0 229 aaPredicted RBP12.35□□□□□ -0.43
DDR1-229ENST00000396342 AUNIPQ9H7T9 357 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 PLEKHA2Q9HB19 425 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 RETNQ9HD89 108 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
DDR1-229ENST00000396342 FKBP11Q9NYL4 201 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 COMMD9Q9P000 198 aa12.35□□□□□ -0.43
DDR1-229ENST00000396342 UPK2O00526 184 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 IGLV2-14P01704 120 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 FGF2P09038 288 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 PTBP1P26599 531 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDR1-229ENST00000396342 TAS2R46P59540 309 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 OR2B8PP59922 312 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 ZNF585BQ52M93 769 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 SLC25A24Q6NUK1 477 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 GVQW1Q8N7I0 195 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 OR1L8Q8NGR8 309 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 FANCD2OSQ96PS1 177 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 EHFQ9NZC4 300 aa12.34□□□□□ -0.43
DDR1-229ENST00000396342 IGLV11-55A0A075B6I3 123 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 FCER2P06734 321 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 OR13C7P0DN81 318 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 NEDD8Q15843 81 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 BTNL8Q6UX41 500 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 OR2C3Q8N628 320 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 OR5H2Q8NGV7 314 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 CACNG8Q8WXS5 425 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 TMEM56Q96MV1 263 aa12.33□□□□□ -0.44
DDR1-229ENST00000396342 SMIM31A0A1B0GVY4 71 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
DDR1-229ENST00000396342 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
DDR1-229ENST00000396342 ATP6V1G2O95670 118 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
DDR1-229ENST00000396342 EIF4EBP1Q13541 118 aaPredicted RBP12.32□□□□□ -0.44
DDR1-229ENST00000396342 TM4SF20Q53R12 229 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 TMEM69Q5SWH9 247 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 SPSB3Q6PJ21 355 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 LINC00322Q6ZN03 302 aaPredicted RBP12.32□□□□□ -0.44
DDR1-229ENST00000396342 C19orf35Q6ZS72 473 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 GDPD1Q8N9F7 314 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 OR6F1Q8NGZ6 308 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 LSM10Q969L4 123 aaKnown RBP12.32□□□□□ -0.44
DDR1-229ENST00000396342 BSCL2Q96G97 398 aaPredicted RBP12.32□□□□□ -0.44
DDR1-229ENST00000396342 GPHA2Q96T91 129 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 TSC22D3Q99576 134 aa12.32□□□□□ -0.44
DDR1-229ENST00000396342 TMEM213A2RRL7 107 aa12.31□□□□□ -0.44
DDR1-229ENST00000396342 OR4C46A6NHA9 309 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms