RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 AQP10Q96PS8 301 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 PRSS2P07478 247 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 POC1AQ8NBT0 407 aa8.8□□□□□ -1
COL4A6-203ENST00000394872 FBLL1A6NHQ2 334 aaKnown RBP8.79□□□□□ -1
COL4A6-203ENST00000394872 TMEM14DPA8MWL7 114 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 TRGC2P03986 189 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 VDAC2P45880 294 aaPredicted RBP8.79□□□□□ -1
COL4A6-203ENST00000394872 UCP3P55916 312 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 CLEC19AQ6UXS0 136 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 MRAP2Q96G30 205 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 UMODP07911 640 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 GPR183P32249 361 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 PSMB11A5LHX3 300 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 CELA3BP08861 270 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 HTN3P15516 51 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 ICAM4Q14773 271 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 COLCA1Q6ZS62 124 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 C7orf71A4D174 169 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 SCN2AQ99250 2005 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 C17orf100A8MU93 164 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 CSRP1P21291 193 aaKnown RBP8.79□□□□□ -1
COL4A6-203ENST00000394872 EMP1P54849 157 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 OSR1Q8TAX0 266 aaPredicted RBP8.79□□□□□ -1
COL4A6-203ENST00000394872 PEMTQ9UBM1 199 aa8.79□□□□□ -1
COL4A6-203ENST00000394872 C12orf77C9JDV5 145 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 CBLN4Q9NTU7 201 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 MRPS16Q9Y3D3 137 aaKnown RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 SUMO2P61956 95 aaKnown RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 ZIC4Q8N9L1 334 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 TGIF2-C20orf24A0A0A6YYL0 155 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 KBTBD11-OT1A0A1B0GTJ5 212 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 GCHFRP30047 84 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 TRBV20OR9-2A0A075B6H5 130 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 AGAP20933 346 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 GCSAMLQ5JQS6 135 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 SAPCD1Q5SSQ6 148 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 ZNF660Q6AZW8 331 aaPredicted RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 OR4D5Q8NGN0 318 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 OR10AG1Q8NH19 301 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 IMMP1LQ96LU5 166 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 TGFBR3LH3BV60 316 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 RRHO14718 337 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 OTX1P32242 354 aaPredicted RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 ATP5IP56385 69 aaPredicted RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 PSG7Q13046 419 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 CD200R1LQ6Q8B3 271 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 SPACA3Q8IXA5 215 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 OR13A1Q8NGR1 328 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 VWCEQ96DN2 955 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 SBF2Q86WG5 1849 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 IL6RP08887 468 aaPredicted RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 SRIP30626 198 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 TEX45Q8NA69 505 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 OR1P1Q8NH06 330 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 JMJD8Q96S16 334 aa8.78□□□□□ -1
COL4A6-203ENST00000394872 MRPL20Q9BYC9 149 aaKnown RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 NPDC1Q9NQX5 325 aaPredicted RBP8.78□□□□□ -1
COL4A6-203ENST00000394872 IGKV1D-43A0A0B4J1Z2 117 aa8.77□□□□□ -1
COL4A6-203ENST00000394872 LINC01587Q99440 93 aa8.77□□□□□ -1
COL4A6-203ENST00000394872 IFI27L2Q9H2X8 130 aa8.77□□□□□ -1
COL4A6-203ENST00000394872 PARLQ9H300 379 aa8.77□□□□□ -1
COL4A6-203ENST00000394872 C21orf62Q9NYP8 219 aa8.77□□□□□ -1
COL4A6-203ENST00000394872 MRPS18CQ9Y3D5 142 aaKnown RBP8.77□□□□□ -1
COL4A6-203ENST00000394872 IGHV3-11P01762 117 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 ASIPP42127 132 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 MEF2CQ06413 473 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 PMCHL1Q16048 86 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 OR13C6PQ8NH95 151 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 C1QTNF5Q9BXJ0 243 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 IQCF6A8MYZ5 107 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 RND3P61587 244 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 PRB3Q04118 309 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 ZXDCQ2QGD7 858 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 MRPL14Q6P1L8 145 aaKnown RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 C1QL2Q7Z5L3 287 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 FBLIM1Q8WUP2 373 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 MARVELD3Q96A59 401 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 SFRP2Q96HF1 295 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 ZNF646O15015 1829 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 MAP1BP46821 2468 aaKnown RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 PARD6GQ9BYG4 376 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 MYOFQ9NZM1 2061 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 SIGLEC5O15389 551 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 FABP2P12104 132 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 RNASE4P34096 147 aaKnown RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 LHX2P50458 406 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 IFITM3Q01628 133 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 ERASQ7Z444 233 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
COL4A6-203ENST00000394872 F11RQ9Y624 299 aaKnown RBP8.77□□□□□ -1.01
COL4A6-203ENST00000394872 M0R381 172 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 NRN1LQ496H8 165 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 NPFFR1Q9GZQ6 430 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 PIKFYVEQ9Y2I7 2098 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 H7C1H1 209 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 FOLR2P14207 255 aa8.76□□□□□ -1.01
COL4A6-203ENST00000394872 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms