RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 NPIPB5A8MRT5 1133 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 NOL3O60936 208 aaKnown RBP23.58■■□□□ 1.37
CMTM4-202ENST00000394106 IFNA6P05013 189 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 S100GP29377 79 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 DCTN2Q13561 401 aaKnown RBP23.58■■□□□ 1.37
CMTM4-202ENST00000394106 NECAP1Q8NC96 275 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 C15orf40Q8WUR7 153 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 FCAMRQ8WWV6 532 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 BCL7BQ9BQE9 202 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 RSRP1Q9BUV0 290 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 ELOVL1Q9BW60 279 aa23.58■■□□□ 1.37
CMTM4-202ENST00000394106 TPPPO94811 219 aa23.57■■□□□ 1.36
CMTM4-202ENST00000394106 REG1AP05451 166 aa23.57■■□□□ 1.36
CMTM4-202ENST00000394106 RNASE10Q5GAN6 216 aaKnown RBP23.57■■□□□ 1.36
CMTM4-202ENST00000394106 DYNC2LI1Q8TCX1 351 aa23.57■■□□□ 1.36
CMTM4-202ENST00000394106 COMMD5Q9GZQ3 224 aa23.57■■□□□ 1.36
CMTM4-202ENST00000394106 MTFP1Q9UDX5 166 aa23.57■■□□□ 1.36
CMTM4-202ENST00000394106 CGB1A6NKQ9 187 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 MARCH11A6NNE9 402 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 CD3DP04234 171 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 PSMB6P28072 239 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 SYNJ2BPP57105 145 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 OR2B8PP59922 312 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 KLF5Q13887 457 aaPredicted RBP23.56■■□□□ 1.36
CMTM4-202ENST00000394106 C15orf32Q32M92 178 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 SLC38A6Q8IZM9 456 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 CCDC59Q9P031 241 aaKnown RBP23.56■■□□□ 1.36
CMTM4-202ENST00000394106 FBXL7Q9UJT9 491 aa23.56■■□□□ 1.36
CMTM4-202ENST00000394106 KRASP01116 189 aa23.55■■□□□ 1.36
CMTM4-202ENST00000394106 RPEL1Q2QD12 228 aa23.55■■□□□ 1.36
CMTM4-202ENST00000394106 ZNF585BQ52M93 769 aa23.55■■□□□ 1.36
CMTM4-202ENST00000394106 TBC1D26Q86UD7 250 aa23.55■■□□□ 1.36
CMTM4-202ENST00000394106 DHFRP00374 187 aa23.54■■□□□ 1.36
CMTM4-202ENST00000394106 G6PCP35575 357 aa23.54■■□□□ 1.36
CMTM4-202ENST00000394106 UCP3P55916 312 aa23.54■■□□□ 1.36
CMTM4-202ENST00000394106 CD69Q07108 199 aa23.54■■□□□ 1.36
CMTM4-202ENST00000394106 HAPLN4Q86UW8 402 aa23.54■■□□□ 1.36
CMTM4-202ENST00000394106 OR6Q1Q8NGQ2 317 aa23.54■■□□□ 1.36
CMTM4-202ENST00000394106 CRYGCP07315 174 aa23.53■■□□□ 1.36
CMTM4-202ENST00000394106 DEFA4P12838 97 aa23.53■■□□□ 1.36
CMTM4-202ENST00000394106 PGAM2P15259 253 aa23.53■■□□□ 1.36
CMTM4-202ENST00000394106 SPNP16150 400 aa23.53■■□□□ 1.36
CMTM4-202ENST00000394106 LSM4Q9Y4Z0 139 aaKnown RBP23.53■■□□□ 1.36
CMTM4-202ENST00000394106 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP23.52■■□□□ 1.36
CMTM4-202ENST00000394106 H3BMQ9 156 aa23.52■■□□□ 1.36
CMTM4-202ENST00000394106 CTRB1P17538 263 aa23.52■■□□□ 1.36
CMTM4-202ENST00000394106 CTRB2Q6GPI1 263 aa23.52■■□□□ 1.36
CMTM4-202ENST00000394106 OR9G4Q8NGQ1 327 aa23.52■■□□□ 1.36
CMTM4-202ENST00000394106 ISOC1Q96CN7 298 aa23.52■■□□□ 1.36
CMTM4-202ENST00000394106 DIRAS2Q96HU8 199 aa23.52■■□□□ 1.36
CMTM4-202ENST00000394106 C6orf62Q9GZU0 229 aaPredicted RBP23.52■■□□□ 1.36
CMTM4-202ENST00000394106 GABARAPH6UMI1 98 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 BMPR1BO00238 502 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 NDUFB8O95169 186 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 TBPP20226 339 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 TATDN3Q17R31 274 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 ARRDC1Q8N5I2 433 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 TMEM229BQ8NBD8 167 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 FANCD2OSQ96PS1 177 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 B9D2Q9BPU9 175 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 QTRT1Q9BXR0 403 aaKnown RBP23.51■■□□□ 1.35
CMTM4-202ENST00000394106 NSG2Q9Y328 171 aa23.51■■□□□ 1.35
CMTM4-202ENST00000394106 IGLC7A0M8Q6 106 aa23.5■■□□□ 1.35
CMTM4-202ENST00000394106 IGHV3-23P01764 117 aa23.5■■□□□ 1.35
CMTM4-202ENST00000394106 TAS2R19P59542 299 aa23.5■■□□□ 1.35
CMTM4-202ENST00000394106 OR4D10Q8NGI6 311 aa23.5■■□□□ 1.35
CMTM4-202ENST00000394106 S4R3C0 116 aa23.5■■□□□ 1.35
CMTM4-202ENST00000394106 TEX50A0A1B0GTY4 177 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 SNAPC5O75971 98 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 FGF2P09038 288 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 HIST1H1BP16401 226 aaKnown RBP23.49■■□□□ 1.35
CMTM4-202ENST00000394106 PI3P19957 117 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 PPP5CP53041 499 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 MRPS10P82664 201 aaKnown RBP23.49■■□□□ 1.35
CMTM4-202ENST00000394106 IL18Q14116 193 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 LHFPL1Q86WI0 220 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 OR10W1Q8NGF6 305 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 HINT2Q9BX68 163 aa23.49■■□□□ 1.35
CMTM4-202ENST00000394106 PPP5D1E7EU14 171 aa23.48■■□□□ 1.35
CMTM4-202ENST00000394106 RAB3DO95716 219 aa23.48■■□□□ 1.35
CMTM4-202ENST00000394106 TRAPPC2P0DI81 140 aa23.48■■□□□ 1.35
CMTM4-202ENST00000394106 TRAPPC2BP0DI82 140 aa23.48■■□□□ 1.35
CMTM4-202ENST00000394106 SCGB2B2Q4G0G5 96 aa23.48■■□□□ 1.35
CMTM4-202ENST00000394106 SRSF8Q9BRL6 282 aaKnown RBP23.48■■□□□ 1.35
CMTM4-202ENST00000394106 OR51B2Q9Y5P1 312 aa23.48■■□□□ 1.35
CMTM4-202ENST00000394106 SORL1Q92673 2214 aa23.48■■□□□ 1.35
CMTM4-202ENST00000394106 CD74P04233 296 aa23.47■■□□□ 1.35
CMTM4-202ENST00000394106 GP9P14770 177 aa23.47■■□□□ 1.35
CMTM4-202ENST00000394106 STEAP1BQ6NZ63 245 aa23.47■■□□□ 1.35
CMTM4-202ENST00000394106 IL34Q6ZMJ4 242 aa23.47■■□□□ 1.35
CMTM4-202ENST00000394106 OR1L8Q8NGR8 309 aa23.47■■□□□ 1.35
CMTM4-202ENST00000394106 FAM212BQ9NTI7 297 aaPredicted RBP23.47■■□□□ 1.35
CMTM4-202ENST00000394106 IGLV11-55A0A075B6I3 123 aa23.46■■□□□ 1.35
CMTM4-202ENST00000394106 IGLV1-51P01701 117 aa23.46■■□□□ 1.35
CMTM4-202ENST00000394106 FAM209BQ5JX69 171 aa23.46■■□□□ 1.35
CMTM4-202ENST00000394106 SMIM4Q8WVI0 70 aa23.46■■□□□ 1.35
CMTM4-202ENST00000394106 EEF1AKMT3Q96AZ1 226 aa23.46■■□□□ 1.35
CMTM4-202ENST00000394106 ZNF486Q96H40 463 aaPredicted RBP23.46■■□□□ 1.35
CMTM4-202ENST00000394106 SLIRPQ9GZT3 109 aaKnown RBP23.46■■□□□ 1.35
CMTM4-202ENST00000394106 OR13C7P0DN81 318 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms