RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 SARAFQ96BY9 339 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 ZNF71Q9NQZ8 489 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 ELOVL5Q9NYP7 299 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 CACNA1GO43497 2377 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 MKRN2OSH3BPM6 223 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 CD99P14209 185 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 STARD4Q96DR4 205 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 NPVFQ9HCQ7 196 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 BOD1L1Q8NFC6 3051 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 EP300Q09472 2414 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 TNFSF13O75888 250 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 GCHFRP30047 84 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 ADMP35318 185 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 GNG10P50151 68 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 HLA-DRB5Q30154 266 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 CT45A1Q5HYN5 189 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 DMRTC2Q8IXT2 367 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 LYG1Q8N1E2 194 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 OR10G8Q8NGN5 311 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 OR52E5Q8NH55 327 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 CT45A3Q8NHU0 189 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 PLSCR4Q9NRQ2 329 aa11.49□□□□□ -0.57
GAPVD1-205ENST00000394084 SAA2-SAA4A0A096LPE2 208 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 CA2P00918 260 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 SAA2P0DJI9 122 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 NPY1RP25929 384 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 RPL31P62899 125 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 TRIP6Q15654 476 aaKnown RBP11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 EFNB3Q15768 340 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 SLC24A4Q8NFF2 622 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 OR4P4Q8NGL7 312 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 OR4S2Q8NH73 311 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 ITLN1Q8WWA0 313 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 TNCP24821 2201 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 FAM90A9PA6NNJ1 464 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 IGFBP2P18065 325 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 CD33P20138 364 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 CBLN1P23435 193 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 PAX5Q02548 391 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 MZT1Q08AG7 82 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 FOXL1Q12952 345 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 TEX38Q6PEX7 206 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
GAPVD1-205ENST00000394084 C15orf61A6NNL5 157 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 F2RL2O00254 374 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 TIMP3P35625 211 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 ZNF90Q03938 601 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 TMEM249Q2WGJ8 235 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 TEPPQ6URK8 271 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 DKK4Q9UBT3 224 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 LSM4Q9Y4Z0 139 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 DSCAMO60469 2012 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 PAX1P15863 534 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 MAP1BP46821 2468 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 MOB3BQ86TA1 216 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 DDB2Q92466 427 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 NOL4LQ96MY1 436 aaPredicted RBP11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 FKBP11Q9NYL4 201 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 SLC25A15Q9Y619 301 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 CNOT1A5YKK6 2376 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 TRAV17A0A0B4J275 112 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 K7EN84 100 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 CGAP01215 116 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 CCKARP32238 428 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 TMPRSS3P57727 454 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 C17orf58Q2M2W7 97 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 ZNRD1Q9P1U0 126 aa11.47□□□□□ -0.57
GAPVD1-205ENST00000394084 YLPM1P49750 1951 aaKnown RBP11.46□□□□□ -0.57
GAPVD1-205ENST00000394084 FRMD6-AS1P0C7T7 363 aa11.46□□□□□ -0.57
GAPVD1-205ENST00000394084 RHOBP62745 196 aa11.46□□□□□ -0.57
GAPVD1-205ENST00000394084 NDUFAF3Q9BU61 184 aa11.46□□□□□ -0.57
GAPVD1-205ENST00000394084 TUBG2Q9NRH3 451 aa11.46□□□□□ -0.57
GAPVD1-205ENST00000394084 PLCE1Q9P212 2302 aa11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 GATA2P23769 480 aaPredicted RBP11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 HSPE1P61604 102 aaKnown RBP11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 OR5I1Q13606 314 aa11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 IQCJQ1A5X6 159 aa11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 FAM216AQ8WUB2 273 aa11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 LOXL4Q96JB6 756 aa11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 LRFN3Q9BTN0 628 aa11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 IDI2-AS1Q9NZ38 188 aa11.46□□□□□ -0.58
GAPVD1-205ENST00000394084 AHRRA9YTQ3 701 aa11.45□□□□□ -0.58
GAPVD1-205ENST00000394084 DEFB109BQ30KR1 87 aa11.45□□□□□ -0.58
GAPVD1-205ENST00000394084 SEM1Q6ZVN7 128 aa11.45□□□□□ -0.58
GAPVD1-205ENST00000394084 RPRMLQ8N4K4 120 aa11.45□□□□□ -0.58
GAPVD1-205ENST00000394084 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
GAPVD1-205ENST00000394084 TP53TG5Q9Y2B4 290 aa11.45□□□□□ -0.58
GAPVD1-205ENST00000394084 CACNA1HO95180 2353 aa11.45□□□□□ -0.58
GAPVD1-205ENST00000394084 TRGV8A0A0C4DH27 118 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 ZNF705FA8MVS1 300 aaPredicted RBP11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 EREGO14944 169 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 SPINK4O60575 86 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 ZNF705DP0CH99 300 aaPredicted RBP11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 ZNF705BP0CI00 300 aaPredicted RBP11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
GAPVD1-205ENST00000394084 KLF3P57682 345 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms