RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 RPRMLQ8N4K4 120 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 NOXO1Q8NFA2 376 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 OR10AG1Q8NH19 301 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 UPRTQ96BW1 309 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 DUX3Q96PT4 197 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 Q9N2K0 584 aa6.83□□□□□ -1.32
LIMS1-203ENST00000393310 RCC2Q9P258 522 aaKnown RBP6.83□□□□□ -1.32
LIMS1-203ENST00000393310 ZNHIT1O43257 154 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 EFNB1P98172 346 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 EDDM3AQ14507 147 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 LIME1Q9H400 295 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 PSG8Q9UQ74 426 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 IGKV1-8A0A0C4DH67 115 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 CENPVL1A0A0U1RR11 272 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 CENPVL3A0A0U1RRI6 287 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 TAPBPO15533 448 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 PRKNO60260 465 aaPredicted RBP6.82□□□□□ -1.32
LIMS1-203ENST00000393310 OR2H2O95918 312 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 KITLGP21583 273 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 FCER1GP30273 86 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 CFHR2P36980 270 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 SRSF7Q16629 238 aaKnown RBP eCLIP6.82□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF506Q5JVG8 444 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 OR5P3Q8WZ94 311 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 SLCO4A1Q96BD0 722 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 NPIPB7O75200 414 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF728P0DKX0 622 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 CMC4P56277 68 aaPredicted RBP6.82□□□□□ -1.32
LIMS1-203ENST00000393310 APOOLQ6UXV4 268 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 SLC22A24Q8N4F4 322 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 PIGCQ92535 297 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 PGLYRP3Q96LB9 341 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 SPANXDQ9BXN6 97 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 MED13LQ71F56 2210 aa6.82□□□□□ -1.32
LIMS1-203ENST00000393310 IGKV3D-15A0A087WSY6 115 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 TINCRA0A1B0GVN0 87 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 CTSBP07858 339 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 HSD17B1P14061 328 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 CRISP2P16562 243 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 RPS4Y1P22090 263 aaKnown RBP6.81□□□□□ -1.32
LIMS1-203ENST00000393310 COX7A1P24310 79 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 FXYD6P3P58550 94 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 DGCR2P98153 550 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 PRSS8Q16651 343 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 UHRF2Q96PU4 802 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 MDFIC2A0A1B0GVS7 189 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF727A8MUV8 499 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 K7EN84 100 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 SIRPB1O00241 398 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 AMBPP02760 352 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 AQP1P29972 269 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 FUT6P51993 359 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 MTCP1P56278 107 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 RPL27P61353 136 aaKnown RBP6.81□□□□□ -1.32
LIMS1-203ENST00000393310 HBG1P69891 147 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 MEF2DQ14814 521 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF585BQ52M93 769 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 HMGN2P46Q86SG4 172 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 OR5D14Q8NGL3 314 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 OR1F12Q8NHA8 337 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 RNF166Q96A37 237 aaPredicted RBP6.81□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF257Q9Y2Q1 563 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 MPC1Q9Y5U8 109 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 SETXQ7Z333 2677 aaKnown RBP6.81□□□□□ -1.32
LIMS1-203ENST00000393310 A0A1B0GWA3 101 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 C7orf66A4D0T2 115 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF732B4DXR9 585 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 WNT2P09544 360 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 GZMBP10144 247 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 IFITM1P13164 125 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 TGFBR1P36897 503 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 HOXA4Q00056 320 aaPredicted RBP6.81□□□□□ -1.32
LIMS1-203ENST00000393310 OR1Q1Q15612 314 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 H2BFWTQ7Z2G1 175 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 C6orf201Q7Z4U5 140 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 OR10V1Q8NGI7 309 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 OR5H2Q8NGV7 314 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 C1QTNF4Q9BXJ3 329 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 NAT8BQ9UHF3 227 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 FZR1Q9UM11 496 aa6.81□□□□□ -1.32
LIMS1-203ENST00000393310 A0A087WUJ7 227 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 A0A0G2JLM5 398 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 CGB1A6NKQ9 187 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 SCGB1C2P0DMR2 95 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 XAF1Q6GPH4 301 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 C11orf87Q6NUJ2 197 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 C16orf82Q7Z2V1 217 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 LRRC29Q8WV35 223 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 PMCHL2Q9BQD1 86 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 CXorf36Q9H7Y0 433 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 NINQ8N4C6 2090 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 TMEM213A2RRL7 107 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 SPINT2O43291 252 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 SLC2A10O95528 541 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 IGHV2-5P01817 119 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 CT62P0C5K7 136 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 ALOX5APP20292 161 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 ZFP36P26651 326 aaKnown RBP6.8□□□□□ -1.32
LIMS1-203ENST00000393310 HLA-DRB3P79483 266 aa6.8□□□□□ -1.32
LIMS1-203ENST00000393310 VAX1Q5SQQ9 334 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms