RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 C4orf3Q8WVX3 66 aa12.55□□□□□ -0.4
CSHL1-204ENST00000392824 MRGPRFQ96AM1 343 aa12.55□□□□□ -0.4
CSHL1-204ENST00000392824 COMMD5Q9GZQ3 224 aa12.55□□□□□ -0.4
CSHL1-204ENST00000392824 BATF3Q9NR55 127 aa12.55□□□□□ -0.4
CSHL1-204ENST00000392824 GPR132Q9UNW8 380 aa12.55□□□□□ -0.4
CSHL1-204ENST00000392824 TRAV3A0A0B4J244 114 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 CCL24O00175 119 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 B3GALNT1O75752 331 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 ATG12O94817 140 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 IL6RP08887 468 aaPredicted RBP12.54□□□□□ -0.4
CSHL1-204ENST00000392824 OR9G9P0C7N8 305 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 KIAA0141Q14154 515 aaPredicted RBP12.54□□□□□ -0.4
CSHL1-204ENST00000392824 CNPY1Q3B7I2 92 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 CADM3Q8N126 398 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 OR5B12Q96R08 314 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 TSC22D3Q99576 134 aa12.54□□□□□ -0.4
CSHL1-204ENST00000392824 RTBDNQ9BSG5 229 aaPredicted RBP12.54□□□□□ -0.4
CSHL1-204ENST00000392824 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 HMX3A6NHT5 357 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 FGF2P09038 288 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 TRIM16LQ309B1 348 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 H2BFWTQ7Z2G1 175 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 TTC9CQ8N5M4 171 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 TP53RKQ96S44 253 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 C5orf66Q9H5L9 145 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 GNB4Q9HAV0 340 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 FKBP11Q9NYL4 201 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 KCNIP3Q9Y2W7 256 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 TNCP24821 2201 aa12.53□□□□□ -0.4
CSHL1-204ENST00000392824 C13orf42A0A1B0GVH6 325 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 BAK1Q16611 211 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 SP6Q3SY56 376 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 SGPP2Q8IWX5 399 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.41
CSHL1-204ENST00000392824 WFDC9Q8NEX5 89 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 DPF1Q92782 380 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 SEC22AQ96IW7 307 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 DUX3Q96PT4 197 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 NAA60Q9H7X0 242 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 PRNDQ9UKY0 176 aa12.52□□□□□ -0.41
CSHL1-204ENST00000392824 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 I3L521 148 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 RBMXL2O75526 392 aaKnown RBP12.51□□□□□ -0.41
CSHL1-204ENST00000392824 BRI3O95415 125 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 DHFRP00374 187 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 IGKV1-39P01597 117 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 IGKV1D-39P04432 117 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 MYOD1P15172 320 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 RAB25P57735 213 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 OR2B8PP59922 312 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 RUNX1Q01196 453 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 DEFB136Q30KP8 78 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 ETV3LQ6ZN32 361 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 MRPL41Q8IXM3 137 aaKnown RBP12.51□□□□□ -0.41
CSHL1-204ENST00000392824 OR11H1Q8NG94 326 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 OR1L8Q8NGR8 309 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 OR4A16Q8NH70 328 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 P2RX4Q99571 388 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 SLC25A21Q9BQT8 299 aaPredicted RBP12.51□□□□□ -0.41
CSHL1-204ENST00000392824 QTRT1Q9BXR0 403 aaKnown RBP12.51□□□□□ -0.41
CSHL1-204ENST00000392824 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
CSHL1-204ENST00000392824 TEX50A0A1B0GTY4 177 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 NAP1L6A6NFF2 107 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 NPIPB5A8MRT5 1133 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 CENPXA8MT69 81 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 E7EUB6 86 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 LGALS1P09382 135 aaKnown RBP12.5□□□□□ -0.41
CSHL1-204ENST00000392824 OR5AC1P0C628 307 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 TRAPPC2P0DI81 140 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 TRAPPC2BP0DI82 140 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 DEFA4P12838 97 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 AKR1C4P17516 323 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 UCP1P25874 307 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 AKR1C2P52895 323 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 DHODHQ02127 395 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
CSHL1-204ENST00000392824 LINC00482Q8N8I6 264 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
CSHL1-204ENST00000392824 RRNAD1Q96FB5 475 aaKnown RBP12.5□□□□□ -0.41
CSHL1-204ENST00000392824 SRSF8Q9BRL6 282 aaKnown RBP12.5□□□□□ -0.41
CSHL1-204ENST00000392824 HINT2Q9BX68 163 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 ZNF257Q9Y2Q1 563 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
CSHL1-204ENST00000392824 LINC00854A0A1B0GVQ3 168 aa12.49□□□□□ -0.41
CSHL1-204ENST00000392824 CRYM-AS1A6NIL9 109 aa12.49□□□□□ -0.41
CSHL1-204ENST00000392824 PSMB6P28072 239 aa12.49□□□□□ -0.41
CSHL1-204ENST00000392824 ZNF616Q08AN1 781 aa12.49□□□□□ -0.41
CSHL1-204ENST00000392824 S100ZQ8WXG8 99 aa12.49□□□□□ -0.41
CSHL1-204ENST00000392824 SDHCQ99643 169 aaPredicted RBP12.49□□□□□ -0.41
CSHL1-204ENST00000392824 TMEM222Q9H0R3 208 aa12.49□□□□□ -0.41
CSHL1-204ENST00000392824 A0A1B0GW64 132 aa12.48□□□□□ -0.41
CSHL1-204ENST00000392824 C15orf61A6NNL5 157 aa12.48□□□□□ -0.41
CSHL1-204ENST00000392824 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms