RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PRRT1Q99946 306 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 SLC50A1Q9BRV3 221 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 MED10Q9BTT4 135 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 MROQ9BYG7 248 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 COMMD5Q9GZQ3 224 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 WDR54Q9H977 334 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 GPR84Q9NQS5 396 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 TAS2R4Q9NYW5 299 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 AK3Q9UIJ7 227 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 PRELID1Q9Y255 219 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 COL7A1Q02388 2944 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 PTPRSQ13332 1948 aa-0.09□□□□□ -2.42
SNORD28B-201ENST00000390993 TNRC6AQ8NDV7 1962 aaKnown RBP-0.1□□□□□ -2.42
SNORD28B-201ENST00000390993 SIPA1L1O43166 1804 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 KIF27Q86VH2 1401 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 PTPRZ1P23471 2315 aaPredicted RBP-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 GREB1Q4ZG55 1949 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 ANAPC1Q9H1A4 1944 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 GOLGA8MH3BSY2 632 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 COX7A2LO14548 114 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 SGCEO43556 437 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 REG1AP05451 166 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 ATP5G1P05496 136 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 CCDC172P0C7W6 258 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 DDTP30046 118 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 NUP62P37198 522 aaPredicted RBP-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 OR10A3P58181 314 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 HLA-DRB3P79483 266 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 HPCAP84074 193 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 SYCP1Q15431 976 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 XKRXQ6PP77 449 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 C5orf46Q6UWT4 87 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 DPPA3Q6W0C5 159 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 SSX8Q7RTT4 187 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 DEFB128Q7Z7B8 93 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 TMEM251Q8N6I4 163 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 GPR32P1Q8NGA4 272 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 OR5B17Q8NGF7 314 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 OR10D3Q8NH80 312 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 MCFD2Q8NI22 146 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 ITFG2Q969R8 447 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 GNPNAT1Q96EK6 184 aaPredicted RBP-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 FAM210AQ96ND0 272 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 TSPAN32Q96QS1 320 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 RBP7Q96R05 134 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 FAM96AQ9H5X1 160 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 CKLFQ9UBR5 152 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 LRPPRCP42704 1394 aaKnown RBP-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 MTUS2Q5JR59 1369 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 KIF24Q5T7B8 1368 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 PEAK1Q9H792 1746 aa-0.1□□□□□ -2.43
SNORD28B-201ENST00000390993 ZNF462Q96JM2 2506 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 TRBV6-8A0A0A6YYG3 113 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 GOLGA8QA0A0J9YX86 632 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 GGT3PA6NGU5 568 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 TRAPPC2LH3BP13 241 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 I3L521 148 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 FAAHO00519 579 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 PROSCO94903 275 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 APOMO95445 188 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 NSA2O95478 260 aaKnown RBP-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 CSTAP01040 98 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 IGLV3-1P01715 115 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 IGHV3-7P01780 117 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 HTR1AP08908 422 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 BAALC-AS2P0C853 105 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 CCL5P13501 91 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 ZNF25P17030 456 aaPredicted RBP-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 RPS4Y1P22090 263 aaKnown RBP-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 HLA-DMBP28068 263 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 MIPP30301 263 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 ZNF80P51504 273 aaPredicted RBP-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 EFNA4P52798 201 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 PSG9Q00887 426 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 RPL18Q07020 188 aaKnown RBP-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 SMAGPQ0VAQ4 97 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 PDE6HQ13956 83 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 LPCAT4Q643R3 524 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 LCN15Q6UWW0 184 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 LINC00575Q6W349 94 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 SOSTDC1Q6X4U4 206 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 ZNF826PQ6ZT77 177 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 LCA10Q71F78 164 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 ZNF550Q7Z398 422 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 GRINAQ7Z429 371 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 JOSD2Q8TAC2 188 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 MSANTD3Q96H12 275 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 SERPINB11Q96P15 392 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 CYTH2Q99418 400 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 NABP2Q9BQ15 211 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 GINS4Q9BRT9 223 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 TIPINQ9BVW5 301 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 PRRG3Q9BZD7 231 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 ASCL3Q9NQ33 180 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 TMEM14CQ9P0S9 112 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 JPT1Q9UK76 154 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 RBMX2Q9Y388 322 aaKnown RBP-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 A0A1W2PP64 1363 aa-0.11□□□□□ -2.43
SNORD28B-201ENST00000390993 CHD2O14647 1828 aaKnown RBP-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms