RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 CSN1S1P47710 185 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 RPL30P62888 115 aaKnown RBP0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 FABP9Q0Z7S8 132 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 MLLT11Q13015 90 aaPredicted RBP0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 CDK5R1Q15078 307 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 RSU1Q15404 277 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 Q1T7F1 81 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 TNFAIP8L3Q5GJ75 292 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 C1orf194Q5T5A4 169 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 PDPK2PQ6A1A2 396 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 FAM173BQ6P4H8 233 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 COMMD7Q86VX2 200 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 SGMS2Q8NHU3 365 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 ACOT12Q8WYK0 555 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 ANKRD7Q92527 254 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 TESCQ96BS2 214 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 ROPN1LQ96C74 230 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 CMTM5Q96DZ9 223 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 RSL24D1Q9UHA3 163 aaKnown RBP0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 TIMM22Q9Y584 194 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 PXMP4Q9Y6I8 212 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 FN1P02751 2386 aaKnown RBP0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 PRRC2BQ5JSZ5 2229 aaKnown RBP0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 PIK3R4Q99570 1358 aa0.42□□□□□ -2.34
RNU6-440P-201ENST00000390882 SETD5Q9C0A6 1442 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 MALRD1Q5VYJ5 2156 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 IGKV2D-26A0A0A0MRZ7 120 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 TRBV10-2A0A0K0K1G8 114 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 M0QZ92 97 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 SDCBPO00560 298 aaPredicted RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 SLC22A1O15245 554 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 HCRTO43612 131 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 NOS1APO75052 506 aaPredicted RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 IGHV3-7P01780 117 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 REG1AP05451 166 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 TFPTP0C1Z6 253 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 SULT1A3P0DMM9 295 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 SULT1A4P0DMN0 295 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 NFYAP23511 347 aaPredicted RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 HLA-DMBP28068 263 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 RPL12P30050 165 aaKnown RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 S100A7P31151 101 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 CASQ1P31415 396 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 BLVRAP53004 296 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 OR4D2P58180 307 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 POLR2GP62487 172 aaKnown RBP eCLIP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 TNFAIP6P98066 277 aaPredicted RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 CAV1Q03135 178 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 EMX1Q04741 257 aaPredicted RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 PLCXD2Q0VAA5 305 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 C10orf55Q5SWW7 151 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 OGFRL1Q5TC84 451 aaPredicted RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 C1orf195Q5TG92 126 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 LRRN1Q6UXK5 716 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 HIST2H3AQ71DI3 136 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 ZNF550Q7Z398 422 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 Q8N2B8 174 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 DEFB125Q8N687 156 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 ZNF676Q8N7Q3 588 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 GPR32P1Q8NGA4 272 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 PIGXQ8TBF5 258 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 DIRAS2Q96HU8 199 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 DRC3Q9H069 523 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 MAP1LC3AQ9H492 121 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 C3orf18Q9UK00 162 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 FUT9Q9Y231 359 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 NUMA1Q14980 2115 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 FLG2Q5D862 2391 aaPredicted RBP0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 KIF24Q5T7B8 1368 aa0.41□□□□□ -2.34
RNU6-440P-201ENST00000390882 DCCP43146 1447 aa0.4□□□□□ -2.34
RNU6-440P-201ENST00000390882 MAST2Q6P0Q8 1798 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 GGT3PA6NGU5 568 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 IBA57-AS1B1ANH7 110 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 I3L521 148 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 CXCR6O00574 342 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 C1QAP02745 245 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 TPM3P06753 285 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 SRP19P09132 144 aaKnown RBP0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 METTL15P1P0C7V9 234 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 FGF6P10767 208 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 KCNE1P15382 129 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 MAP2K4P45985 399 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 REG1BP48304 166 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 MARCKSL1P49006 195 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 AP2S1P53680 142 aaPredicted RBP0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 MAP3K7CLP57077 242 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 NAA20P61599 178 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 SURF2Q15527 256 aaPredicted RBP0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 DEFB115Q30KQ5 88 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 COQ5Q5HYK3 327 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 GLT8D1Q68CQ7 371 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 FAM151BQ6UXP7 276 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 DHFR2Q86XF0 187 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 TMEM156Q8N614 296 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR1M1Q8NGA1 313 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR8B3Q8NGG8 313 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 YIPF3Q9GZM5 350 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR8D2Q9GZM6 311 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 FAM96AQ9H5X1 160 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 FGFR1OP2Q9NVK5 253 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms