RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 FAM57AQ8TBR7 257 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 GPX8Q8TED1 209 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 HEXDCQ8WVB3 486 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 SPSB1Q96BD6 273 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 SPATA33Q96N06 139 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 DOHHQ9BU89 302 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 MND1Q9BWT6 205 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 VCX3BQ9H321 246 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR51I2Q9H344 312 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 RMND5AQ9H871 391 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 RHOFQ9HBH0 211 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 C14orf132Q9NPU4 83 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 SCN3BQ9NY72 215 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 TAS2R4Q9NYW5 299 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 GALPQ9UBC7 116 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5V1Q9UGF6 321 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 NOSIPQ9Y314 301 aaKnown RBP-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMED7Q9Y3B3 224 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 MINOS1-NBL1R4GNA1 71 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 WDR19Q8NEZ3 1342 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 TECPR2O15040 1411 aa-2□□□□□ -2.73
RNU6-540P-201ENST00000384622 MYH13Q9UKX3 1938 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 ITSN2Q9NZM3 1697 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRAV39A0A0B4J263 110 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A0J9YY99 117 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 PNMA8CA0A1B0GUJ8 204 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 EXOC1LA0A1B0GW35 172 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 MGAT4DA6NG13 374 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 C9JAW5 83 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR1F1O43749 312 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 NEMFO60524 1076 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 ECI2O75521 394 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR2F2O95006 317 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 GABARAPO95166 117 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 FGFR1OPO95684 399 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 MOCS2O96007 188 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 PPYP01298 95 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 GSTA2P09210 222 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 HSPD1P10809 573 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 RPS4Y1P22090 263 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC2A5P22732 501 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 GTF2E2P29084 291 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CRABP2P29373 138 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 MC5RP33032 325 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 KRT20P35900 424 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 ARL2P36404 184 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 GPX4P36969 197 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 FDFT1P37268 417 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 LPAR6P43657 344 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 BDKRB1P46663 353 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 AP2S1P53680 142 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 DNAJB13P59910 316 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 UBE2L3P68036 154 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 BTG2P78543 158 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 MRPS10P82664 201 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SCGB2A2Q13296 93 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5I1Q13606 314 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 TNXAQ16473 311 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC25A35Q3KQZ1 300 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CAVIN4Q5BKX8 364 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CT45A1Q5HYN5 189 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 COA6Q5JTJ3 125 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CTSL3PQ5NE16 218 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 XAF1Q6GPH4 301 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 C8orf74Q6P047 294 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 LEG1Q6P5S2 330 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 FAM151BQ6UXP7 276 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 NRARPQ7Z6K4 114 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 MRPL55Q7Z7F7 128 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 KTN1-AS1Q86SY8 53 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 OOSP2Q86WS3 158 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 TBC1D19Q8N5T2 526 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 COX18Q8N8Q8 333 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 GPR26Q8NDV2 337 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR4F17Q8NGA8 305 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR2T10Q8NGZ9 312 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 ZNF675Q8TD23 568 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 MYOZ3Q8TDC0 251 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC5A11Q8WWX8 675 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 GEMIN6Q8WXD5 167 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 FBXO32Q969P5 355 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 MCUR1Q96AQ8 359 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CPNE2Q96FN4 548 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 LINC00208Q96KT6 92 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CAPZA3Q96KX2 299 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 PSKH2Q96QS6 385 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR4F4Q96R69 305 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 NAP1L4Q99733 375 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SH3GL1Q99961 368 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 TAPBPLQ9BX59 468 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SPATA16Q9BXB7 569 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 LINC00597Q9H2U6 94 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 BOLA2Q9H3K6 86 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 C1orf198Q9H425 327 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SUDS3Q9H7L9 328 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SND1-IT1Q9HBX3 110 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 BCL2L10Q9HD36 194 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 RAB9BQ9NP90 201 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM138Q9NPI0 162 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 BATF3Q9NR55 127 aa-2.01□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms