RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 FGFRL1Q8N441 504 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 ASCL3Q9NQ33 180 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 OR6C3Q9NZP0 311 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 IGHV3-21A0A0B4J1V1 117 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 LILRA1O75019 489 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 RPL23P62829 140 aaKnown RBP15.9■□□□□ 0.14
CSPG5-202ENST00000383738 MMDQ15546 238 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 RPEL1Q2QD12 228 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 LHFPL1Q86WI0 220 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 MDS2Q8NDY4 140 aa15.9■□□□□ 0.14
CSPG5-202ENST00000383738 SLC25A10Q9UBX3 287 aaPredicted RBP15.9■□□□□ 0.14
CSPG5-202ENST00000383738 NTF4P34130 210 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 KIR2DL2P43627 348 aaPredicted RBP15.89■□□□□ 0.13
CSPG5-202ENST00000383738 SERF2P84101 59 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 TBR1Q16650 682 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 OR2D3Q8NGH3 330 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 MRPL37Q9BZE1 423 aaKnown RBP15.89■□□□□ 0.13
CSPG5-202ENST00000383738 ALPK3Q96L96 1907 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 LOC390937A0A1W2PQ73 354 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 USF1P22415 310 aaPredicted RBP15.89■□□□□ 0.13
CSPG5-202ENST00000383738 ZNF137PP52743 207 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 FAM57AQ8TBR7 257 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 LINC00470Q9BZP3 86 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 IGHV2OR16-5A0A0B4J2B6 119 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 ATP5G3P48201 142 aa15.89■□□□□ 0.13
CSPG5-202ENST00000383738 REPIN1Q9BWE0 567 aaKnown RBP15.89■□□□□ 0.13
CSPG5-202ENST00000383738 PARD6GQ9BYG4 376 aaPredicted RBP15.89■□□□□ 0.13
CSPG5-202ENST00000383738 CHEK1O14757 476 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 MIC13Q5XKP0 118 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 HILPDAQ9Y5L2 63 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 IL18BPO95998 194 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 CD40P25942 277 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 BLNKQ8WV28 456 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 NABP1Q96AH0 204 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 SFXN3Q9BWM7 321 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 TDGF1P13385 188 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 RPL24P83731 157 aaKnown RBP15.88■□□□□ 0.13
CSPG5-202ENST00000383738 ZDHHC16Q969W1 377 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 TMEM45BQ96B21 275 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 PRDM13Q9H4Q3 707 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 PTPRSQ13332 1948 aa15.88■□□□□ 0.13
CSPG5-202ENST00000383738 E9PLN8 166 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 SSBP3Q9BWW4 388 aaPredicted RBP15.87■□□□□ 0.13
CSPG5-202ENST00000383738 PLA2G2EQ9NZK7 142 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 SNAI2O43623 268 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 MUC15Q8N387 334 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 ZNF835Q9Y2P0 537 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 WISP2O76076 250 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 GZMHP20718 246 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 DCAF16Q9NXF7 216 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 OOEPA6NGQ2 149 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 SRSF10O75494 262 aaKnown RBP15.87■□□□□ 0.13
CSPG5-202ENST00000383738 NAPSAO96009 420 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 UQCRFS1P47985 274 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 MFAP2P55001 183 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 ARF6P62330 175 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 MOB1BQ7L9L4 216 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 VKORC1L1Q8N0U8 176 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 FAM216BQ8N7L0 139 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 SNHG12Q9BXW3 62 aa15.87■□□□□ 0.13
CSPG5-202ENST00000383738 IGHV3OR16-10A0A075B7F0 116 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 A0A087WWC5 75 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 SERTM2A0A1B0GWG4 89 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 NPSP0C0P6 89 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 SRIP30626 198 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 TIMM23BQ5SRD1 257 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 SERF1AO75920 110 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 TFF3Q07654 80 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 GCSAMLQ5JQS6 135 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 DOLPP1Q86YN1 238 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 DENND4AQ7Z401 1863 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 BRS3P32247 399 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 NHLH1Q02575 133 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 OR4A47Q6IF82 309 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 ZNF738Q8NE65 137 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 FAM216AQ8WUB2 273 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 OR5P3Q8WZ94 311 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 TMEM208Q9BTX3 173 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 RNF115Q9Y4L5 304 aa15.86■□□□□ 0.13
CSPG5-202ENST00000383738 TEX38Q6PEX7 206 aa15.85■□□□□ 0.13
CSPG5-202ENST00000383738 C1QL4Q86Z23 238 aa15.85■□□□□ 0.13
CSPG5-202ENST00000383738 IGHV3-48P01763 117 aa15.85■□□□□ 0.13
CSPG5-202ENST00000383738 SRSF4Q08170 494 aaKnown RBP15.85■□□□□ 0.13
CSPG5-202ENST00000383738 C10orf91Q5T1B1 145 aa15.85■□□□□ 0.13
CSPG5-202ENST00000383738 CYP2G1PQ6ZSU1 146 aa15.85■□□□□ 0.13
CSPG5-202ENST00000383738 GAL3ST2Q9H3Q3 398 aa15.85■□□□□ 0.13
CSPG5-202ENST00000383738 A8MWP6 167 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 ZNF462Q96JM2 2506 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 HELTA6NFD8 242 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 PEAR1Q5VY43 1037 aaPredicted RBP15.84■□□□□ 0.13
CSPG5-202ENST00000383738 C1QTNF5Q9BXJ0 243 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 LY6HO94772 140 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 LEMD1Q68G75 181 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 SMIM15Q7Z3B0 74 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 RNF166Q96A37 237 aaPredicted RBP15.84■□□□□ 0.13
CSPG5-202ENST00000383738 LIME1Q9H400 295 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 TRANK1O15050 2925 aa15.84■□□□□ 0.13
CSPG5-202ENST00000383738 CDKN1AP38936 164 aa15.83■□□□□ 0.13
CSPG5-202ENST00000383738 GPR6P46095 362 aaPredicted RBP15.83■□□□□ 0.13
CSPG5-202ENST00000383738 QRFPP83859 136 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms