RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 MED12Q93074 2177 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 NTN3O00634 580 aaPredicted RBP12.6□□□□□ -0.39
SNPH-202ENST00000381873 ARL14EPLP0DKL9 152 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 MEF2CQ06413 473 aaPredicted RBP12.6□□□□□ -0.39
SNPH-202ENST00000381873 SRSF12Q8WXF0 261 aaKnown RBP12.6□□□□□ -0.39
SNPH-202ENST00000381873 RNASE6Q93091 150 aaKnown RBP12.6□□□□□ -0.39
SNPH-202ENST00000381873 ZNF837Q96EG3 531 aaPredicted RBP12.6□□□□□ -0.39
SNPH-202ENST00000381873 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 MYO7BQ6PIF6 2116 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 DOCK6Q96HP0 2047 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 DOCK4Q8N1I0 1966 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 H3BTX0 84 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 GCGP01275 180 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 RPL24P83731 157 aaKnown RBP12.6□□□□□ -0.39
SNPH-202ENST00000381873 CFHR1Q03591 330 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 DUX5Q96PT3 197 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 PAM16Q9Y3D7 125 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 GREB1Q4ZG55 1949 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 A6NDN8 102 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 DIRC3C9JPN6 131 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
SNPH-202ENST00000381873 TSC2P49815 1807 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 TGFAP01135 160 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 TM2D1Q9BX74 207 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 NEUROG3Q9Y4Z2 214 aa12.6□□□□□ -0.39
SNPH-202ENST00000381873 TANC1Q9C0D5 1861 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 IGHV3OR16-13A0A075B7E8 117 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 IGHV3-74A0A0B4J1X5 117 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 C7orf69Q9H7B7 122 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 A0A0G2JLM5 398 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 UBE2L6O14933 153 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 ACAA1P09110 424 aaPredicted RBP12.59□□□□□ -0.39
SNPH-202ENST00000381873 LINC00114Q6XXX2 140 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.59□□□□□ -0.39
SNPH-202ENST00000381873 KBTBD11-OT1A0A1B0GTJ5 212 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 RAXQ9Y2V3 346 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 LHX2P50458 406 aa12.59□□□□□ -0.39
SNPH-202ENST00000381873 CA2P00918 260 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 KLK2P20151 261 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 EIF3GO75821 320 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNPH-202ENST00000381873 RND3P61587 244 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 GOLT1AQ6ZVE7 132 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 SIAH2O43255 324 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 TBX6O95947 436 aaPredicted RBP12.58□□□□□ -0.4
SNPH-202ENST00000381873 MOSP00540 346 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 TRGC1P0CF51 173 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 NMUP48645 174 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 VWA8A3KMH1 1905 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 H0YL77 283 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 C2orf68Q2NKX9 166 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 TCF24Q7RTU0 167 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 CLDND2Q8NHS1 167 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 PGLYRP4Q96LB8 373 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 SGK494Q96LW2 274 aa12.58□□□□□ -0.4
SNPH-202ENST00000381873 RALGAPA1Q6GYQ0 2036 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 SAPCD1Q5SSQ6 148 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 PET117Q6UWS5 81 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 IQCF6A8MYZ5 107 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
SNPH-202ENST00000381873 PSMG3Q9BT73 122 aaPredicted RBP12.57□□□□□ -0.4
SNPH-202ENST00000381873 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
SNPH-202ENST00000381873 A0A1B0GTI1 187 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 STAG3L2P0CL84 134 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 UCP1P25874 307 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 LBHQ53QV2 105 aaPredicted RBP12.57□□□□□ -0.4
SNPH-202ENST00000381873 ABLIM2Q6H8Q1 611 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 PUSL1Q8N0Z8 303 aaKnown RBP12.57□□□□□ -0.4
SNPH-202ENST00000381873 MRPL13Q9BYD1 178 aaKnown RBP12.57□□□□□ -0.4
SNPH-202ENST00000381873 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 SHISA3A0PJX4 238 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 OR4C46A6NHA9 309 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 GCSHP23434 173 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 NUTF2P61970 127 aaKnown RBP12.57□□□□□ -0.4
SNPH-202ENST00000381873 RTN4RL2Q86UN3 420 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 SEMA5BQ9P283 1151 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 LINC00312Q9Y6C7 94 aa12.57□□□□□ -0.4
SNPH-202ENST00000381873 RRHO14718 337 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 IGKV1D-33P01593 117 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 IGKV1-33P01594 117 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 M0QZK8 103 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 GGCTO75223 188 aaKnown RBP12.56□□□□□ -0.4
SNPH-202ENST00000381873 AGAP20933 346 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 ZNF418Q8TF45 676 aaPredicted RBP12.56□□□□□ -0.4
SNPH-202ENST00000381873 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 FBXL7Q9UJT9 491 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 DOCK10Q96BY6 2186 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 IGLV3-32A0A0A0MS00 114 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 CELA3BP08861 270 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 DANCRP0C864 163 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 DLX6P56179 175 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 WBP1Q96G27 269 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms