RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 A0A087WX48 190 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 RPS20P60866 119 aaKnown RBP10.58□□□□□ -0.72
CHD3-203ENST00000380358 MYOM1P52179 1685 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 LEPP41159 167 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 IMMP2LQ96T52 175 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 VCX2Q9H322 139 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 OGG1O15527 345 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 ARPC1AQ92747 370 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 CABIN1Q9Y6J0 2220 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 ZNF250P15622 560 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 P2RY4P51582 365 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 COX19Q49B96 90 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 OR13A1Q8NGR1 328 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 VKORC1Q9BQB6 163 aa10.58□□□□□ -0.72
CHD3-203ENST00000380358 ZNF703Q9H7S9 590 aaPredicted RBP10.58□□□□□ -0.72
CHD3-203ENST00000380358 KIF13AQ9H1H9 1805 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 CELA3AP09093 270 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 GALP22466 123 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 P2RY6Q15077 328 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 TMEM249Q2WGJ8 235 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 TRAV40A0A0B4J280 105 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 CFHR3Q02985 330 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 FAM19A2Q8N3H0 131 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 TAF15Q92804 592 aaKnown RBP eCLIP10.57□□□□□ -0.72
CHD3-203ENST00000380358 CACNA1DQ01668 2161 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 SRSF4Q08170 494 aaKnown RBP10.57□□□□□ -0.72
CHD3-203ENST00000380358 DMKNQ6E0U4 476 aaPredicted RBP10.57□□□□□ -0.72
CHD3-203ENST00000380358 MAPK1IP1LQ8NDC0 245 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 COX14Q96I36 57 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 CGAP01215 116 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 CD28P10747 220 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 SCN9AQ15858 1988 aa10.57□□□□□ -0.72
CHD3-203ENST00000380358 GNG5P63218 68 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 A0A1W2PQD3 144 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 MSGN1A6NI15 193 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 TMEM50AO95807 157 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 CTSBP07858 339 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 FAM216BQ8N7L0 139 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 OR11H4Q8NGC9 324 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 FHITP49789 147 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 MEF2BQ02080 365 aaPredicted RBP10.56□□□□□ -0.72
CHD3-203ENST00000380358 C12orf54Q6X4T0 127 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 CTAG1AP78358 180 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 ZNF79Q15937 498 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 SELENOHQ8IZQ5 122 aaKnown RBP10.56□□□□□ -0.72
CHD3-203ENST00000380358 EDIL3O43854 480 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 NANOS3P60323 173 aaKnown RBP10.56□□□□□ -0.72
CHD3-203ENST00000380358 LIMS2Q7Z4I7 341 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 CLPSL1A2RUU4 121 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 C1QCP02747 245 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 CYP2G1PQ6ZSU1 146 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 DRAM1Q8N682 238 aa10.56□□□□□ -0.72
CHD3-203ENST00000380358 PSMG3Q9BT73 122 aaPredicted RBP10.56□□□□□ -0.72
CHD3-203ENST00000380358 ZFC3H1O60293 1989 aaKnown RBP10.56□□□□□ -0.72
CHD3-203ENST00000380358 B9A039 149 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 LINC01465Q8N7H1 131 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
CHD3-203ENST00000380358 FANCMQ8IYD8 2048 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 SEC16AO15027 2179 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 C5P01031 1676 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 TMEM127O75204 238 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 HSPE1P61604 102 aaKnown RBP10.55□□□□□ -0.72
CHD3-203ENST00000380358 PAPPA-AS1Q5QFB9 102 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 MCM3APO60318 1980 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 ZNF501Q96CX3 271 aaPredicted RBP10.55□□□□□ -0.72
CHD3-203ENST00000380358 C10orf35Q96D05 121 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 FOXS1O43638 330 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 EFEMP2O95967 443 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 IGFBP2P18065 325 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 AGAP20933 346 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 GTF3C1Q12789 2109 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 PSMG4Q5JS54 123 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 PPP1R32Q7Z5V6 425 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 OR2K2Q8NGT1 345 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 RPRMQ9NS64 109 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 A0A0G2JLM5 398 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 H0Y980 276 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 TMEM155Q4W5P6 130 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 H1FOOQ8IZA3 346 aaPredicted RBP10.55□□□□□ -0.72
CHD3-203ENST00000380358 PAX4O43316 350 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 HOGA1Q86XE5 327 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 TMEM252Q8N6L7 170 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 NRIP2Q9BQI9 281 aa10.55□□□□□ -0.72
CHD3-203ENST00000380358 LNP1A1A4G5 178 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
CHD3-203ENST00000380358 MSRB3Q8IXL7 192 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 C19orf24Q9BVV8 132 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 TCF19Q9Y242 345 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 HMSDA8MTL9 139 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 LILRA6Q6PI73 481 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 WDR34Q96EX3 536 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 ZNF818PQ6ZRF7 136 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 SLC25A45Q8N413 288 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms