RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 G6PC2Q9NQR9 355 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 C19orf12Q9NSK7 152 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 CLDN16Q9Y5I7 305 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 CGB1A6NKQ9 187 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 MFNGO00587 321 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 DFFBO76075 338 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 OR2H2O95918 312 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 IFNA1P01562 189 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 IGHMP01871 453 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 THBS3P49746 956 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 ERVK11-1P61568 191 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 H3F3AP84243 136 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 ZNF324BQ6AW86 544 aaPredicted RBP5.47□□□□□ -1.53
NEDD9-202ENST00000379446 CLEC18BQ6UXF7 455 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 LGI3Q8N145 548 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 ZDHHC22Q8N966 263 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 ABHD14BQ96IU4 210 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 CARHSP1Q9Y2V2 147 aaKnown RBP5.47□□□□□ -1.53
NEDD9-202ENST00000379446 FANCMQ8IYD8 2048 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 DUS4LO95620 317 aaKnown RBP5.47□□□□□ -1.53
NEDD9-202ENST00000379446 H2AFB1P0C5Y9 115 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 UBE2G1P62253 170 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 UNC119Q13432 240 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 RNF133Q8WVZ7 376 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 FOXC2Q99958 501 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 HDHD3Q9BSH5 251 aaPredicted RBP5.47□□□□□ -1.53
NEDD9-202ENST00000379446 ALX4Q9H161 411 aaPredicted RBP5.47□□□□□ -1.53
NEDD9-202ENST00000379446 AK3Q9UIJ7 227 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 ADAMTS9Q9P2N4 1935 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 NPIPB11E5RHQ5 1161 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 H3BQ15 152 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 M0R143 59 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 JTBO76095 146 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 CLPSP04118 112 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 CD74P04233 296 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 TRGC1P0CF51 173 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 DLK1P80370 383 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 DHODHQ02127 395 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 DAZAP2Q15038 168 aaPredicted RBP5.47□□□□□ -1.53
NEDD9-202ENST00000379446 OR4A47Q6IF82 309 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 OR1L8Q8NGR8 309 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 FAM131CQ96AQ9 280 aa5.47□□□□□ -1.53
NEDD9-202ENST00000379446 RPUSD4Q96CM3 377 aaKnown RBP5.47□□□□□ -1.53
NEDD9-202ENST00000379446 CDH23Q9H251 3354 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 XKRY2A2RUG3 117 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 H0Y980 276 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 TAS2R30P59541 319 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 PIGYQ3MUY2 71 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 SLC25A47Q6Q0C1 308 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 TOMM20LQ6UXN7 152 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 OR5B3Q8NH48 314 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 SGMS2Q8NHU3 365 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 RBMXL1Q96E39 390 aaKnown RBP5.46□□□□□ -1.53
NEDD9-202ENST00000379446 OR10C1Q96KK4 312 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 KCNIP2Q9NS61 270 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 MOB4Q9Y3A3 225 aa5.46□□□□□ -1.53
NEDD9-202ENST00000379446 KIF26AQ9ULI4 1882 aaPredicted RBP5.46□□□□□ -1.53
NEDD9-202ENST00000379446 PHF3Q92576 2039 aaKnown RBP5.46□□□□□ -1.54
NEDD9-202ENST00000379446 OR4C46A6NHA9 309 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 HBZP02008 142 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 GALR1P47211 349 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 MYPOPQ86VE0 399 aaPredicted RBP5.46□□□□□ -1.54
NEDD9-202ENST00000379446 LFNGQ8NES3 379 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 OR10P1Q8NGE3 313 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 DYRK2Q92630 601 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 SLC25A31Q9H0C2 315 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 LPAR5Q9H1C0 372 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 AURKAIP1Q9NWT8 199 aaPredicted RBP5.46□□□□□ -1.54
NEDD9-202ENST00000379446 PAM16Q9Y3D7 125 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 NOTCH1P46531 2555 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 PRR14LQ5THK1 2151 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 SFT2D2O95562 160 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 MOSP00540 346 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 FSTP19883 344 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 KIR2DS2P43631 304 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 MMP16P51512 607 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 HTD2P86397 168 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 DEFB112Q30KQ8 113 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 SNAI3Q3KNW1 292 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 LDLRAD2Q5SZI1 272 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 ABLIM2Q6H8Q1 611 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 ASPHD2Q6ICH7 369 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 ERASQ7Z444 233 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 C2orf50Q96LR7 162 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 SAMD10Q9BYL1 202 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 SH3BGRL3Q9H299 93 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 TRGV2A0A075B6R0 118 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 H0YIZ8 118 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 CST4P01036 141 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 IFI6P09912 130 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 ZNF735P0CB33 412 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 HIST1H1BP16401 226 aaKnown RBP5.46□□□□□ -1.54
NEDD9-202ENST00000379446 NHLH2Q02577 135 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 ZNF345Q14585 488 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 C1orf100Q5SVJ3 147 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 FDX2Q6P4F2 183 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 PRSS54Q6PEW0 395 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 OR1B1Q8NGR6 318 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 AQP3Q92482 292 aa5.46□□□□□ -1.54
NEDD9-202ENST00000379446 CYYR1Q96J86 154 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms