RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 GOSR1O95249 250 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 USF1P22415 310 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-203ENST00000378169 SPACA3Q8IXA5 215 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 OR2D3Q8NGH3 330 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 ELOVL5Q9NYP7 299 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 MPZP25189 248 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 C18orf12Q96KH6 178 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 PARLQ9H300 379 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 KLRB1Q12918 225 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 CEP295Q9C0D2 2601 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 NCOA6Q14686 2063 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-203ENST00000378169 ETV2O00321 342 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-203ENST00000378169 P01737 135 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 TMEM42Q69YG0 159 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 OR4A47Q6IF82 309 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 PACRGQ96M98 296 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-203ENST00000378169 ARFGEF3Q5TH69 2177 aa11.06□□□□□ -0.64
NPHP4-203ENST00000378169 TGIF2-C20orf24A0A0A6YYL0 155 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-203ENST00000378169 MFAP2P55001 183 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 STXBP6Q8NFX7 210 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 SPSB4Q96A44 273 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 NABP2Q9BQ15 211 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-203ENST00000378169 CRYBB3P26998 211 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF137PP52743 207 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 PQLC2Q6ZP29 291 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 YLPM1P49750 1951 aaKnown RBP11.05□□□□□ -0.64
NPHP4-203ENST00000378169 C2orf16Q68DN1 1984 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF98A6NK75 572 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 M0QZ24 198 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 DLL1O00548 723 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 SFTPCP11686 197 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 ID3Q02535 119 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 STPG3Q8N7X2 389 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 TMEM186Q96B77 213 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 CLEC7AQ9BXN2 247 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 NPCDR1Q9BY65 106 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 IGHV3OR16-10A0A075B7F0 116 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 PGPA6NDG6 321 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 MOSP00540 346 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF324BQ6AW86 544 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-203ENST00000378169 OR1L6Q8NGR2 347 aa11.05□□□□□ -0.64
NPHP4-203ENST00000378169 SNRNP40Q96DI7 357 aaKnown RBP11.05□□□□□ -0.64
NPHP4-203ENST00000378169 TRAV34A0A0B4J273 112 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 OR2J3O76001 311 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 NAPSAO96009 420 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 PAX6P26367 422 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 PRSS3P2Q8NHM4 247 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 GTF3AQ92664 365 aaKnown RBP11.04□□□□□ -0.64
NPHP4-203ENST00000378169 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 MIOXQ9UGB7 285 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 S4R3C0 116 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 SELENOTP62341 195 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 LRRC75BQ2VPJ9 315 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF525Q8N782 197 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 PSMG3Q9BT73 122 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-203ENST00000378169 IFT22Q9H7X7 185 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF430Q9H8G1 570 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-203ENST00000378169 HIGD1AQ9Y241 93 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 UNC80Q8N2C7 3258 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 LIPFP07098 398 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
NPHP4-203ENST00000378169 RPL29P47914 159 aaKnown RBP11.04□□□□□ -0.64
NPHP4-203ENST00000378169 LINC00205P59089 165 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 FXYD3Q14802 87 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF788Q6ZQV5 615 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 MRPL20Q9BYC9 149 aaKnown RBP11.04□□□□□ -0.64
NPHP4-203ENST00000378169 DNAJC4Q9NNZ3 241 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 PLSCR4Q9NRQ2 329 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 RNF24Q9Y225 148 aa11.04□□□□□ -0.64
NPHP4-203ENST00000378169 MORN2Q502X0 79 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 PCSK4Q6UW60 755 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 HIST1H2BAQ96A08 127 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 FBXL15Q9H469 300 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 SAA2-SAA4A0A096LPE2 208 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 ORM1P02763 201 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 SAA2P0DJI9 122 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-203ENST00000378169 PRNTQ86SH4 94 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 WFDC1Q9HC57 220 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 SONP18583 2426 aaKnown RBP11.03□□□□□ -0.64
NPHP4-203ENST00000378169 LOC105371242A0A075B767 164 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 FCER1GP30273 86 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 NUBP1P53384 320 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 RSPO1Q2MKA7 263 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-203ENST00000378169 WDR73Q6P4I2 378 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 C1orf147Q96MC9 270 aaPredicted RBP11.03□□□□□ -0.64
NPHP4-203ENST00000378169 P2RX4Q99571 388 aa11.03□□□□□ -0.64
NPHP4-203ENST00000378169 C8orf88P0DMB2 117 aa11.02□□□□□ -0.64
NPHP4-203ENST00000378169 IGFBP2P18065 325 aa11.02□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF146Q15072 292 aa11.02□□□□□ -0.64
NPHP4-203ENST00000378169 C11orf42Q8N5U0 333 aa11.02□□□□□ -0.64
NPHP4-203ENST00000378169 ZCCHC14Q8WYQ9 949 aaKnown RBP11.02□□□□□ -0.64
NPHP4-203ENST00000378169 RBM14Q96PK6 669 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms