RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 LHX4Q969G2 390 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 FLYWCH2Q96CP2 140 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RBMXL1Q96E39 390 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 PATZ1Q9HBE1 687 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 hCG_1809904A0A1W2PP81 198 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 A0A1W2PPE2 198 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 A0A1W2PR64 198 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 A0A1W2PRV1 198 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 CYSRT1A8MQ03 144 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 LIPFP07098 398 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 MC5RP33032 325 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 REG1BP48304 166 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RAB11AP62491 216 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 DLK1P80370 383 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 DIAPH2-AS1Q14236 149 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 ETV3LQ6ZN32 361 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 OR5B3Q8NH48 314 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 TMEM170AQ8WVE7 144 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 CLEC7AQ9BXN2 247 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 NKX6-2Q9C056 277 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 ENY2Q9NPA8 101 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 WDR83OSQ9Y284 106 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RRHO14718 337 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 CCL20P78556 96 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 GUCA2BQ16661 112 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SLC24A4Q8NFF2 622 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 VSTM2AQ8TAG5 236 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SUN5Q8TC36 379 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 NPCDR1Q9BY65 106 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 EIF5A2Q9GZV4 153 aaKnown RBP14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 VSIRQ9H7M9 311 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 KPTNQ9Y664 436 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 CFAP46Q8IYW2 2715 aa14.6□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SOX15O60248 233 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 MPDU1O75352 247 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 GOSR1O95249 250 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 MBP02144 154 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 NPY1RP25929 384 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 CD1BP29016 333 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 ATP5IP56385 69 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RPS16P62249 146 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 TMEM167AQ8TBQ9 72 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SFT2D1Q8WV19 159 aa14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RCC1LQ96I51 464 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-201ENST00000374943 TEX50A0A1B0GTY4 177 aa14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 C22orf46C9J442 243 aa14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 C17orf112F2Z3M2 114 aa14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 F12P00748 615 aaPredicted RBP14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 USF1P22415 310 aaPredicted RBP14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 BTN1A1Q13410 526 aa14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 ZNF726P1Q15940 193 aa14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 UBTD1Q9HAC8 227 aa14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 PLEKHA3Q9HB20 300 aa14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 AMMECR1Q9Y4X0 333 aaPredicted RBP14.58□□□□□ -0.07
HLA-DQB1-201ENST00000374943 TENM4Q6N022 2769 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 A0A1B0GV50 99 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 RBFOX3A6NFN3 312 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 INS-IGF2F8WCM5 200 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 SNAPINO95295 136 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 IGLV2-23P01705 113 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 PPT1P50897 306 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ACSM6Q6P461 480 aa14.58□□□□□ -0.08
HLA-DQB1-201ENST00000374943 FNDC10F2Z333 226 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 BUB1B-PAK6H3BSN5 160 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 M0R1W7 72 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 MYOD1P15172 320 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 LGALS7P47929 136 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ELLP55199 621 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 RPL8P62917 257 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 BSXQ3C1V8 233 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ZNF506Q5JVG8 444 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 Q8N7P7 452 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ZNF709Q8N972 641 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 SSBP3Q9BWW4 388 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 SLC35B3Q9H1N7 401 aa14.57□□□□□ -0.08
HLA-DQB1-201ENST00000374943 CDKN1AP38936 164 aa14.56□□□□□ -0.08
HLA-DQB1-201ENST00000374943 GPR6P46095 362 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB1-201ENST00000374943 EFNA4P52798 201 aa14.56□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OR4P4Q8NGL7 312 aa14.56□□□□□ -0.08
HLA-DQB1-201ENST00000374943 CLDND2Q8NHS1 167 aa14.56□□□□□ -0.08
HLA-DQB1-201ENST00000374943 MYO18BQ8IUG5 2567 aa14.56□□□□□ -0.08
HLA-DQB1-201ENST00000374943 DNASE2O00115 360 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 CA2P00918 260 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 IGKV1D-33P01593 117 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 IGKV1-33P01594 117 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 IFNA4P05014 189 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 PMS2P11Q13670 270 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ZNF787Q6DD87 383 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 TREML4Q6UXN2 200 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 SSX7Q7RTT5 188 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 RPP25LQ8N5L8 163 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OR1L8Q8NGR8 309 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 NDUFA4L2Q9NRX3 87 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ONECUT1Q9UBC0 465 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 LOC105371242A0A075B767 164 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 LY6LH3BQJ8 138 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 VMA21Q3ZAQ7 101 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 C2orf83Q53S99 150 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 FFAR4Q5NUL3 377 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 RARRES2Q99969 163 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms