RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 H3BUT2 72 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 ISLRO14498 428 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 HIST1H1DP16402 221 aaKnown RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 IGFBP3P17936 291 aaPredicted RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 BCL3P20749 454 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 H2BFSP57053 126 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 DGCR2P98153 550 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 CD226Q15762 336 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 FAM90A2PQ658T7 463 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 SSX8Q7RTT4 187 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 ZFP62Q8NB50 900 aaPredicted RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 PRSS22Q9GZN4 317 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 MYOFQ9NZM1 2061 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 C15orf61A6NNL5 157 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 PTHP01270 115 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 LOXP28300 417 aaPredicted RBP6.54□□□□□ -1.36
USP48-203ENST00000374732 ZNF345Q14585 488 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 PRR30Q53SZ7 412 aaPredicted RBP6.54□□□□□ -1.36
USP48-203ENST00000374732 VKORC1L1Q8N0U8 176 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 TOMM5Q8N4H5 51 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 MBD6Q96DN6 1003 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 IMMP2LQ96T52 175 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 A6NDN8 102 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 NPIPB7O75200 414 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 MT-ND6P03923 174 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 GLIPR1P48060 266 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 CTXN1P60606 82 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 CX3CL1P78423 397 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 SPHARQ15513 63 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 CEACAM19Q7Z692 300 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 ARPC1AQ92747 370 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 EIF5A2Q9GZV4 153 aaKnown RBP6.54□□□□□ -1.36
USP48-203ENST00000374732 SLC35B3Q9H1N7 401 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 ZNF442Q9H7R0 627 aa6.54□□□□□ -1.36
USP48-203ENST00000374732 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.54□□□□□ -1.36
USP48-203ENST00000374732 KIF26AQ9ULI4 1882 aaPredicted RBP6.53□□□□□ -1.36
USP48-203ENST00000374732 KIAA1549LQ6ZVL6 1849 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 TRAV18A0A075B6X5 111 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 SHISA3A0PJX4 238 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 DIRC3C9JPN6 131 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 SOD1P00441 154 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 OR7A5Q15622 319 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 C19orf48Q6RUI8 117 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 C1QL2Q7Z5L3 287 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 KCTD12Q96CX2 325 aaKnown RBP6.53□□□□□ -1.36
USP48-203ENST00000374732 DNAJA3Q96EY1 480 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 MCHR1Q99705 422 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 C21orf62Q9NYP8 219 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 TMEM202A6NGA9 273 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 CD300LBA8K4G0 201 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 J3QQQ9 107 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 GNGT2O14610 69 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 SCTP09683 121 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 ZGLP1P0C6A0 271 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 SLC25A4P12235 298 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 INSL3P51460 131 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 RPS4XP62701 263 aaKnown RBP6.53□□□□□ -1.36
USP48-203ENST00000374732 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
USP48-203ENST00000374732 LINC00303Q3SY05 128 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 ETDBQ3ZM63 59 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
USP48-203ENST00000374732 TMEFF1Q8IYR6 380 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 C10orf126Q8N4M7 172 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 VSTM2AQ8TAG5 236 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 OR10A2Q9H208 303 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 MDFICQ9P1T7 246 aa6.53□□□□□ -1.36
USP48-203ENST00000374732 SF3B6Q9Y3B4 125 aaKnown RBP6.53□□□□□ -1.36
USP48-203ENST00000374732 TMED7-TICAM2A0A0A6YYA0 188 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 K7EMT4 169 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 HSPB6O14558 160 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 MYOD1P15172 320 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 CRYBB3P26998 211 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 PFN2P35080 140 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 LPAR6P43657 344 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 P2RX1P51575 399 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 ATXN7L3Q14CW9 347 aaPredicted RBP6.52□□□□□ -1.36
USP48-203ENST00000374732 TESK1Q15569 626 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 SH2D6Q7Z4S9 175 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 GCSAMQ8N6F7 178 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 SMRP1Q8NCR6 262 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 RTN4IP1Q8WWV3 396 aaPredicted RBP6.52□□□□□ -1.36
USP48-203ENST00000374732 PDCD1LG2Q9BQ51 273 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 NDUFB11Q9NX14 153 aa6.52□□□□□ -1.36
USP48-203ENST00000374732 REM1O75628 298 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 HOXD3P31249 432 aaPredicted RBP6.52□□□□□ -1.37
USP48-203ENST00000374732 KLF5Q13887 457 aaPredicted RBP6.52□□□□□ -1.37
USP48-203ENST00000374732 SLC25A35Q3KQZ1 300 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 SLC25A48Q6ZT89 311 aaKnown RBP6.52□□□□□ -1.37
USP48-203ENST00000374732 C10orf111Q8N326 155 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 ZIC4Q8N9L1 334 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 EEF1AKMT3Q96AZ1 226 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 C18orf15Q96N68 181 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 KLK5Q9Y337 293 aaPredicted RBP6.52□□□□□ -1.37
USP48-203ENST00000374732 IER3IP1Q9Y5U9 82 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 BRCA2P51587 3418 aa6.52□□□□□ -1.37
USP48-203ENST00000374732 LRRK1Q38SD2 2015 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms