RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RPUSD4Q96CM3 377 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 DCTN5Q9BTE1 182 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 QTRT1Q9BXR0 403 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 TMEM133Q9H2Q1 129 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 TMEM231Q9H6L2 316 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 RPS10P5Q9NQ39 176 aa7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 LSM4Q9Y4Z0 139 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-202ENST00000373720 COLCA2A8K830 154 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 H3BQ15 152 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 M0R1W7 72 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 DVL1O14640 695 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 PPP1R2P9O14990 202 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 C1QL1O75973 258 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 IGHV2-70P01814 119 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 OPN1MWP04001 364 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 LIPFP07098 398 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 OPN1MW2P0DN77 364 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 OPN1MW3P0DN78 364 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 IGHV1-8P0DP01 117 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 NPBWR1P48145 328 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 CDC34P49427 236 aaPredicted RBP7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 TAS2R45P59539 299 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 ERVFRD-1P60508 538 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 RPL8P62917 257 aaKnown RBP7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 RPL19P84098 196 aaKnown RBP7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 RPL39P5Q59GN2 51 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 OR2B11Q5JQS5 317 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 CYP2G1PQ6ZSU1 146 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 C22orf34Q6ZV56 151 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 TCF23Q7RTU1 214 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 TGIF2LYQ8IUE0 185 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 TGIF2LXQ8IUE1 241 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 MMD2Q8IY49 270 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 STXBP6Q8NFX7 210 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 OR8B3Q8NGG8 313 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 UBALD1Q8TB05 177 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 ZCCHC14Q8WYQ9 949 aaKnown RBP7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 NEUROG1Q92886 237 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 ST6GALNAC6Q969X2 333 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 ANAPC16Q96DE5 110 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 OR8B2Q96RD0 313 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 IMMP2LQ96T52 175 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 RSG1Q9BU20 258 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 DOK5Q9P104 306 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 GNG13Q9P2W3 67 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 NAT8Q9UHE5 227 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 RNF24Q9Y225 148 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 LY96Q9Y6Y9 160 aa7.13□□□□□ -1.27
SNRNP40-202ENST00000373720 CEP250Q9BV73 2442 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 FAM74A7A6NL05 159 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 C9JQL5 133 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 H0YJW9 148 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 CLDN34H7C241 214 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 LOXP28300 417 aaPredicted RBP7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 DLX6P56179 175 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 LTC4SQ16873 150 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 IZUMO4Q1ZYL8 232 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 TMEM241Q24JQ0 296 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 PQLC2Q6ZP29 291 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 DTX2Q86UW9 622 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 ABHD12Q8N2K0 398 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 KIR3DL3Q8N743 410 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 ZNF114Q8NC26 417 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 LY6G5BQ8NDX9 201 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 C22orf15Q8WYQ4 148 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 RAB24Q969Q5 203 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 HARBI1Q96MB7 349 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 NABP2Q9BQ15 211 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 MRPL32Q9BYC8 188 aaKnown RBP7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 MS4A7Q9GZW8 240 aaPredicted RBP7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 PRORYQ9H606 182 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 TMEM167BQ9NRX6 74 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 RAXQ9Y2V3 346 aa7.12□□□□□ -1.27
SNRNP40-202ENST00000373720 TEX50A0A1B0GTY4 177 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 NXPH3O95157 252 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 OR2C1O95371 312 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 SNRNP70P08621 437 aaKnown RBP7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 STAG3L2P0CL84 134 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 STAG3L3P0CL85 134 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 OR13C7P0DN81 318 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 AREGP15514 252 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 SPINK2P20155 84 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 ID4P47928 161 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 RND2P52198 227 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 CCL20P78556 96 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 HAGHQ16775 308 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 SPRNQ5BIV9 151 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 PVRIGQ6DKI7 326 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 CCDC144NLQ6NUI1 221 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 LCN15Q6UWW0 184 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 RXFP4Q8TDU9 374 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 GATAD1Q8WUU5 269 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 H1FXQ92522 213 aaKnown RBP7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 UHRF2Q96PU4 802 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 PFDN5Q99471 154 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 CLEC7AQ9BXN2 247 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 SDF2L1Q9HCN8 221 aa7.11□□□□□ -1.27
SNRNP40-202ENST00000373720 SLC45A2Q9UMX9 530 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms