RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 RPL27AP46776 148 aaKnown RBP7.61□□□□□ -1.19
CD48-202ENST00000368046 INSL3P51460 131 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 KRTAP10-11P60412 298 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 IL18Q14116 193 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 ZNF585BQ52M93 769 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 RNASE12Q5GAN4 147 aaKnown RBP7.61□□□□□ -1.19
CD48-202ENST00000368046 C9orf66Q5T8R8 295 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 SLC38A6Q8IZM9 456 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 ADAD2Q8NCV1 583 aaKnown RBP7.61□□□□□ -1.19
CD48-202ENST00000368046 DMBX1Q8NFW5 382 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 TERB2Q8NHR7 220 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 MCFD2Q8NI22 146 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 DCUN1D4Q92564 292 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 C6orf62Q9GZU0 229 aaPredicted RBP7.61□□□□□ -1.19
CD48-202ENST00000368046 NXF2Q9GZY0 626 aaKnown RBP7.61□□□□□ -1.19
CD48-202ENST00000368046 FXYD6Q9H0Q3 95 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 HRASLSQ9HDD0 168 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 SLC2A9Q9NRM0 540 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 FAM212BQ9NTI7 297 aaPredicted RBP7.61□□□□□ -1.19
CD48-202ENST00000368046 AURKAIP1Q9NWT8 199 aaPredicted RBP7.61□□□□□ -1.19
CD48-202ENST00000368046 COMMD9Q9P000 198 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 PLXNB1O43157 2135 aa7.61□□□□□ -1.19
CD48-202ENST00000368046 IGHV4OR15-8A0A075B7B6 117 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 A0A087WW49 117 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 TRBV9A0A0B4J1U6 114 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 FABP12A6NFH5 140 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 HMX3A6NHT5 357 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 TEX22C9J3V5 150 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 OVOL1O14753 267 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 S1PR2O95136 353 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 RAB3DO95716 219 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 KRASP01116 189 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 ZNF735P0CB33 412 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 HLA-GP17693 338 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 HOXD3P31249 432 aaPredicted RBP7.6□□□□□ -1.19
CD48-202ENST00000368046 TAS2R19P59542 299 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 DGCR2P98153 550 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 PHLDA2Q53GA4 152 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 C10orf55Q5SWW7 151 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 STEAP1BQ6NZ63 245 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 ZNF343Q6P1L6 599 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 TBC1D26Q86UD7 250 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 LHFPL1Q86WI0 220 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 DLX4Q92988 240 aaPredicted RBP7.6□□□□□ -1.19
CD48-202ENST00000368046 ZNF486Q96H40 463 aaPredicted RBP7.6□□□□□ -1.19
CD48-202ENST00000368046 FYTTD1Q96QD9 318 aaKnown RBP7.6□□□□□ -1.19
CD48-202ENST00000368046 SOSTQ9BQB4 213 aa7.6□□□□□ -1.19
CD48-202ENST00000368046 RSL24D1Q9UHA3 163 aaKnown RBP7.6□□□□□ -1.19
CD48-202ENST00000368046 TRAV3A0A0B4J244 114 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 TEX50A0A1B0GTY4 177 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 DPPA5A6NC42 116 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 MARCH11A6NNE9 402 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 NPIPB5A8MRT5 1133 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 SEC14L6B5MCN3 397 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 ZNF701M0R085 212 aaPredicted RBP7.59□□□□□ -1.19
CD48-202ENST00000368046 GSTZ1O43708 216 aaPredicted RBP7.59□□□□□ -1.19
CD48-202ENST00000368046 DHFRP00374 187 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 CRYGCP07315 174 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.19
CD48-202ENST00000368046 ERVK-16P61578 105 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 RND3P61587 244 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 ATP5G2Q06055 141 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 ZNF429Q86V71 674 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 NECAP1Q8NC96 275 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 OR4D10Q8NGI6 311 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 ZFAND1Q8TCF1 268 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 MRAPQ8TCY5 172 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 SMIM4Q8WVI0 70 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 COMMD5Q9GZQ3 224 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 RBM38Q9H0Z9 239 aaKnown RBP7.59□□□□□ -1.19
CD48-202ENST00000368046 AKIP1Q9NQ31 210 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 TMEM140Q9NV12 185 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 PEF1Q9UBV8 284 aaKnown RBP7.59□□□□□ -1.19
CD48-202ENST00000368046 ZNF257Q9Y2Q1 563 aa7.59□□□□□ -1.19
CD48-202ENST00000368046 NOTCH3Q9UM47 2321 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 A0A1B0GW64 132 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 ANKRD34BA5PLL1 514 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 CGB1A6NKQ9 187 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 FAM223BA6NKX1 122 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 DISC1C4P0D8 188 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 RBMXL2O75526 392 aaKnown RBP7.58□□□□□ -1.2
CD48-202ENST00000368046 SNAPC5O75971 98 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 PRH1P02810 166 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 AKAIN1P0CW23 69 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 MYOD1P15172 320 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 PGAM2P15259 253 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 RPA2P15927 270 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 CTRB1P17538 263 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 ZP3P21754 424 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 PSMB6P28072 239 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 G6PCP35575 357 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 SLURP1P55000 103 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 OR2B8PP59922 312 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 RHOGP84095 191 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 ZNF45Q02386 682 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 MEF2DQ14814 521 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 TATDN3Q17R31 274 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 KLK9Q2XQG4 91 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 CTRB2Q6GPI1 263 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 FAM223AQ8IWN6 122 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms