RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 DEFB121Q5J5C9 76 aa18.4■□□□□ 0.54
PFDN2-201ENST00000368010 ARRDC1Q8N5I2 433 aa18.4■□□□□ 0.54
PFDN2-201ENST00000368010 PEF1Q9UBV8 284 aaKnown RBP18.4■□□□□ 0.54
PFDN2-201ENST00000368010 TRBV9A0A0B4J1U6 114 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 TRAV3A0A0B4J244 114 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 A0A1B0GW64 132 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 MARCH11A6NNE9 402 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 GABARAPH6UMI1 98 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 CD3DP04234 171 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 MYOD1P15172 320 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 LPAR6P43657 344 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 NECAP1Q8NC96 275 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 COMMD5Q9GZQ3 224 aa18.39■□□□□ 0.53
PFDN2-201ENST00000368010 C6orf62Q9GZU0 229 aaPredicted RBP18.39■□□□□ 0.53
PFDN2-201ENST00000368010 FGF2P09038 288 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 RPA2P15927 270 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 TAS2R19P59542 299 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 ATP5G2Q06055 141 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 DCTN2Q13561 401 aaKnown RBP18.38■□□□□ 0.53
PFDN2-201ENST00000368010 ACSM6Q6P461 480 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 TBC1D26Q86UD7 250 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 TMEM229BQ8NBD8 167 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 DIRAS2Q96HU8 199 aa18.38■□□□□ 0.53
PFDN2-201ENST00000368010 OR2J3O76001 311 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 DHFRP00374 187 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 CRYGCP07315 174 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 AREGP15514 252 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 PSMB6P28072 239 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 OR2B8PP59922 312 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 SSBP1Q04837 148 aaKnown RBP18.37■□□□□ 0.53
PFDN2-201ENST00000368010 EXOSC2Q13868 293 aaKnown RBP18.37■□□□□ 0.53
PFDN2-201ENST00000368010 ZNF585BQ52M93 769 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 OR4C12Q96R67 309 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 SLIRPQ9GZT3 109 aaKnown RBP18.37■□□□□ 0.53
PFDN2-201ENST00000368010 RABL2AQ9UBK7 228 aaPredicted RBP18.37■□□□□ 0.53
PFDN2-201ENST00000368010 RABL2BQ9UNT1 228 aa18.37■□□□□ 0.53
PFDN2-201ENST00000368010 ZNF256Q9Y2P7 627 aaPredicted RBP18.37■□□□□ 0.53
PFDN2-201ENST00000368010 CGB1A6NKQ9 187 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 KRASP01116 189 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 TRBV12-3P01733 135 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 IL18Q14116 193 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 LHFPL1Q86WI0 220 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 PRR25Q96S07 402 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 SRSF8Q9BRL6 282 aaKnown RBP18.36■□□□□ 0.53
PFDN2-201ENST00000368010 ELOVL1Q9BW60 279 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 FAM212BQ9NTI7 297 aaPredicted RBP18.36■□□□□ 0.53
PFDN2-201ENST00000368010 CEPT1Q9Y6K0 416 aa18.36■□□□□ 0.53
PFDN2-201ENST00000368010 RAB3DO95716 219 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 CD74P04233 296 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 PGAM2P15259 253 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 CTRB1P17538 263 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 C15orf32Q32M92 178 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 CTRB2Q6GPI1 263 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 STEAP1BQ6NZ63 245 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 C19orf35Q6ZS72 473 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 CADM3Q8N126 398 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 SMIM4Q8WVI0 70 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 ZNF486Q96H40 463 aaPredicted RBP18.35■□□□□ 0.53
PFDN2-201ENST00000368010 FBXL7Q9UJT9 491 aa18.35■□□□□ 0.53
PFDN2-201ENST00000368010 G6PCP35575 357 aa18.34■□□□□ 0.53
PFDN2-201ENST00000368010 KLF5Q13887 457 aaPredicted RBP18.34■□□□□ 0.53
PFDN2-201ENST00000368010 RPEL1Q2QD12 228 aa18.34■□□□□ 0.53
PFDN2-201ENST00000368010 FAM209BQ5JX69 171 aa18.34■□□□□ 0.53
PFDN2-201ENST00000368010 THOC7Q6I9Y2 204 aaKnown RBP18.34■□□□□ 0.53
PFDN2-201ENST00000368010 OR4D10Q8NGI6 311 aa18.34■□□□□ 0.53
PFDN2-201ENST00000368010 OR6Q1Q8NGQ2 317 aa18.34■□□□□ 0.53
PFDN2-201ENST00000368010 QTRT1Q9BXR0 403 aaKnown RBP18.34■□□□□ 0.53
PFDN2-201ENST00000368010 IGLC7A0M8Q6 106 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 CCDC160A6NGH7 325 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 CTDSPLO15194 276 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 SNAPC5O75971 98 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 LY86O95711 162 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 REG1AP05451 166 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 DEFA4P12838 97 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 HIST1H1BP16401 226 aaKnown RBP18.33■□□□□ 0.52
PFDN2-201ENST00000368010 PPP5CP53041 499 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 TATDN3Q17R31 274 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 MCFD2Q8NI22 146 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 FANCD2OSQ96PS1 177 aa18.33■□□□□ 0.52
PFDN2-201ENST00000368010 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.32■□□□□ 0.52
PFDN2-201ENST00000368010 PTBP1P26599 531 aaKnown RBP eCLIP18.32■□□□□ 0.52
PFDN2-201ENST00000368010 SYNJ2BPP57105 145 aa18.32■□□□□ 0.52
PFDN2-201ENST00000368010 RND3P61587 244 aa18.32■□□□□ 0.52
PFDN2-201ENST00000368010 MEF2DQ14814 521 aa18.32■□□□□ 0.52
PFDN2-201ENST00000368010 SCGB2B2Q4G0G5 96 aa18.32■□□□□ 0.52
PFDN2-201ENST00000368010 HSD17B13Q7Z5P4 300 aaPredicted RBP18.32■□□□□ 0.52
PFDN2-201ENST00000368010 OR9G4Q8NGQ1 327 aa18.32■□□□□ 0.52
PFDN2-201ENST00000368010 OR1L8Q8NGR8 309 aa18.32■□□□□ 0.52
PFDN2-201ENST00000368010 TSC22D3Q99576 134 aa18.32■□□□□ 0.52
PFDN2-201ENST00000368010 TEX50A0A1B0GTY4 177 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 TRAPPC2P0DI81 140 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 TRAPPC2BP0DI82 140 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 PI3P19957 117 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 PIGPP57054 158 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 KLK9Q2XQG4 91 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 TERB2Q8NHR7 220 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 RSL24D1Q9UHA3 163 aaKnown RBP18.31■□□□□ 0.52
PFDN2-201ENST00000368010 KLK9Q9UKQ9 250 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 PRNDQ9UKY0 176 aa18.31■□□□□ 0.52
PFDN2-201ENST00000368010 NSG2Q9Y328 171 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms