RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 RFLNBQ8N5W9 214 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 H0YL77 283 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 THY1P04216 161 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 CCL8P80075 99 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 C1orf185Q5T7R7 199 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 POC1AQ8NBT0 407 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 SRSF12Q8WXF0 261 aaKnown RBP6.29□□□□□ -1.4
SYNE1-208ENST00000367256 SLC25A38Q96DW6 304 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 DCTN5Q9BTE1 182 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 TRAV30A0A087WSZ9 112 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 IGHV5-10-1A0A0J9YXX1 117 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 NANOS3P60323 173 aaKnown RBP6.29□□□□□ -1.4
SYNE1-208ENST00000367256 RND3P61587 244 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 CLDN16Q9Y5I7 305 aa6.29□□□□□ -1.4
SYNE1-208ENST00000367256 TMEM50AO95807 157 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 BIVMQ86UB2 503 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 MBD1Q9UIS9 605 aaPredicted RBP6.28□□□□□ -1.4
SYNE1-208ENST00000367256 TRAV8-6A0A0B4J262 113 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 CBLN1P23435 193 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 CENPWQ5EE01 88 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 DNAJC4Q9NNZ3 241 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 GCM2O75603 506 aaPredicted RBP6.28□□□□□ -1.4
SYNE1-208ENST00000367256 H2BFSP57053 126 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 Q6AWC8 147 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 C10orf111Q8N326 155 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 CCL19Q99731 98 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 TICRRQ7Z2Z1 1910 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 TMEM262E9PQX1 116 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 NPIPB7O75200 414 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 GPR6P46095 362 aaPredicted RBP6.28□□□□□ -1.4
SYNE1-208ENST00000367256 GOLT1AQ6ZVE7 132 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 PTPRDP23468 1912 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 IGHV3-72A0A0B4J1Y9 119 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 CTAG1AP78358 180 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 POU2AF1Q16633 256 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 Q5PR19 223 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 DCAF10Q5QP82 559 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 NIT1Q86X76 327 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 TRPM7Q96QT4 1865 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 A0A1B0GWB2 263 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 SYNGR3O43761 229 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 FTH1P19P0C7X4 201 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 IGHV1OR15-9A0A0B4J2B8 117 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 MFAP4P55083 255 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 EFNB1P98172 346 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 SAMD13Q5VXD3 122 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 ZNF721Q8TF20 911 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 C19orf67A6NJJ6 358 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 J3QW42 95 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 C5orf66Q9H5L9 145 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 CHODLQ9H9P2 273 aa6.28□□□□□ -1.4
SYNE1-208ENST00000367256 RBMY1BA6NDE4 496 aaKnown RBP6.27□□□□□ -1.4
SYNE1-208ENST00000367256 RBMY1EA6NEQ0 496 aaKnown RBP6.27□□□□□ -1.4
SYNE1-208ENST00000367256 RBMY1DP0C7P1 496 aaKnown RBP6.27□□□□□ -1.4
SYNE1-208ENST00000367256 RBMY1A1P0DJD3 496 aaKnown RBP6.27□□□□□ -1.4
SYNE1-208ENST00000367256 RBMY1CP0DJD4 496 aa6.27□□□□□ -1.4
SYNE1-208ENST00000367256 HOXA5P20719 270 aa6.27□□□□□ -1.4
SYNE1-208ENST00000367256 ZNF658BQ4V348 819 aaPredicted RBP6.27□□□□□ -1.4
SYNE1-208ENST00000367256 VKORC1L1Q8N0U8 176 aa6.27□□□□□ -1.4
SYNE1-208ENST00000367256 PHLDA1Q8WV24 401 aaPredicted RBP6.27□□□□□ -1.4
SYNE1-208ENST00000367256 DERL1Q9BUN8 251 aa6.27□□□□□ -1.4
SYNE1-208ENST00000367256 DPRXA6NFQ7 191 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 MGST3O14880 152 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 TGFAP01135 160 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 C2orf68Q2NKX9 166 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 SPCS1Q9Y6A9 102 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 H3BTX0 84 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 FAM159AQ6UWV7 190 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 CYP2G1PQ6ZSU1 146 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 SELENOHQ8IZQ5 122 aaKnown RBP6.27□□□□□ -1.41
SYNE1-208ENST00000367256 NDUFAF3Q9BU61 184 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 CXorf66Q5JRM2 361 aaPredicted RBP6.27□□□□□ -1.41
SYNE1-208ENST00000367256 OR51G1Q8NGK1 321 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 EEF1AKMT3Q96AZ1 226 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 TRBV7-9A0A0J9YWB2 115 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 NKX2-8O15522 239 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 MOSPD3O75425 235 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 LILRA6Q6PI73 481 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 TMEM92Q6UXU6 159 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 FMC1Q96HJ9 113 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 COX6B1P14854 86 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 TPRX1Q8N7U7 411 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 OPN3Q9H1Y3 402 aaPredicted RBP6.27□□□□□ -1.41
SYNE1-208ENST00000367256 TNFRSF18Q9Y5U5 241 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 BRCA1P38398 1863 aaKnown RBP6.27□□□□□ -1.41
SYNE1-208ENST00000367256 ZNF146Q15072 292 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 AICDAQ9GZX7 198 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 TMEM229AB2RXF0 380 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 CNTFRP26992 372 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 ASIPP42127 132 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 ZFP36L2P47974 494 aaKnown RBP6.27□□□□□ -1.41
SYNE1-208ENST00000367256 DNASE2BQ8WZ79 361 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 C18orf15Q96N68 181 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 IGHV4-39P01824 125 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 C8orf88P0DMB2 117 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 SIGLEC14Q08ET2 396 aa6.27□□□□□ -1.41
SYNE1-208ENST00000367256 P2RY6Q15077 328 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms