RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 BRWD1-AS2P59051 145 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 RHOBP62745 196 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 PRR27Q6MZM9 219 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 STPG3Q8N7X2 389 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 TMEM68Q96MH6 324 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 TMEM208Q9BTX3 173 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 WNT10AQ9GZT5 417 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 TMEM140Q9NV12 185 aa6.81□□□□□ -1.32
CD46-208ENST00000367042 TNRC6BQ9UPQ9 1833 aaKnown RBP6.8□□□□□ -1.32
CD46-208ENST00000367042 MLNRO43193 412 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 SP1P08047 785 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 IL6RP08887 468 aaPredicted RBP6.8□□□□□ -1.32
CD46-208ENST00000367042 FOXL1Q12952 345 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 TIGITQ495A1 244 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 DMRTA1Q5VZB9 504 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 TEPPQ6URK8 271 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 FAM19A2Q8N3H0 131 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 ZNRF1Q8ND25 227 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 GGTLC1Q9BX51 225 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 NPVFQ9HCQ7 196 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 KLF13Q9Y2Y9 288 aaPredicted RBP6.8□□□□□ -1.32
CD46-208ENST00000367042 POLEQ07864 2286 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 HCFC1P51610 2035 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 ZFHX4Q86UP3 3567 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 HELTA6NFD8 242 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 TCF21O43680 179 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 IGFBP2P18065 325 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 ERVK11-1P61568 191 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 CENPWQ5EE01 88 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 SLC35E4Q6ICL7 350 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 ACP7Q6ZNF0 438 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 CENPVQ7Z7K6 275 aaPredicted RBP6.8□□□□□ -1.32
CD46-208ENST00000367042 LYG1Q8N1E2 194 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 IL36BQ9NZH7 164 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 RPH3ALQ9UNE2 315 aa6.8□□□□□ -1.32
CD46-208ENST00000367042 COLQQ9Y215 455 aaPredicted RBP6.8□□□□□ -1.32
CD46-208ENST00000367042 MRPS18CQ9Y3D5 142 aaKnown RBP6.8□□□□□ -1.32
CD46-208ENST00000367042 CA1P00915 261 aaPredicted RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 NPY1RP25929 384 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 PAFAH1B2P68402 229 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 ARSJQ5FYB0 599 aaPredicted RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 Q6ZN92 141 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 MIR17HGQ75NE6 70 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 STARD4Q96DR4 205 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 CDX2Q99626 313 aaPredicted RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 SSBP3Q9BWW4 388 aaPredicted RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 TCF19Q9Y242 345 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 TBL2Q9Y4P3 447 aaKnown RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 YLPM1P49750 1951 aaKnown RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 KMT2EQ8IZD2 1858 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 STAG3L2P0CL84 134 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 STAG3L3P0CL85 134 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 CD99P14209 185 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 IGHV1-2P23083 117 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 SRIP30626 198 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 PRDX2P32119 198 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 DUTP33316 252 aaKnown RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 OPRK1P41145 380 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 EFNB3Q15768 340 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 BORCS7Q96B45 105 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 DIRC2Q96SL1 478 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 CXXC4Q9H2H0 198 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 ZNF318Q5VUA4 2279 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 PKDREJQ9NTG1 2253 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 K7EN84 100 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 M0QZK8 103 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 TMPRSS2O15393 492 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 SS18L1O75177 396 aaPredicted RBP6.79□□□□□ -1.32
CD46-208ENST00000367042 MPDU1O75352 247 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 RAB4AP20338 218 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 MMDQ15546 238 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 SPATA45Q537H7 98 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 FAM201AQ5SY85 155 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 HES3Q5TGS1 186 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 WDR82Q6UXN9 313 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 TMEM144Q7Z5S9 345 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 C11orf42Q8N5U0 333 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 SLC24A4Q8NFF2 622 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 CLCF1Q9UBD9 225 aa6.79□□□□□ -1.32
CD46-208ENST00000367042 TMEM210A6NLX4 147 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 C9orf172C9J069 976 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 DLEU1O43261 78 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 IGHV3-48P01763 117 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 WNT2P09544 360 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 BRS3P32247 399 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
CD46-208ENST00000367042 MOB3BQ86TA1 216 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 ST6GALNAC3Q8NDV1 305 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 GNB4Q9HAV0 340 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 SLC35D1Q9NTN3 355 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 PLCE1Q9P212 2302 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 KIR2DL5BA0A0G2JN68 375 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 KIR2DL5BA0A0G2JPC4 375 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 SIAH2O43255 324 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 SPRY3O43610 288 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 ZNF718Q3SXZ3 478 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 ZNF766Q5HY98 468 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 KIR2DL5AQ8N109 375 aa6.78□□□□□ -1.32
CD46-208ENST00000367042 PPP1R35Q8TAP8 253 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms