RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SCN9AQ15858 1988 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 PSMD12O00232 456 aaPredicted RBP1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 LEPROTO15243 131 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 KLRC4O43908 158 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 TCRBP04435 133 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 TFPTP0C1Z6 253 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 HIST1H1TP22492 207 aaPredicted RBP1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 PEBP1P30086 187 aaKnown RBP1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 CSN1S1P47710 185 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 PSMD8P48556 350 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 IDH3GP51553 393 aaPredicted RBP1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 PSME3P61289 254 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 RANP62826 216 aaKnown RBP1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 ERHP84090 104 aaKnown RBP1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 AESQ08117 197 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 GUK1Q16774 197 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 PCOTHQ58A44 107 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 SPOPLQ6IQ16 392 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 OR51V1Q9H2C8 321 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 PAQR5Q9NXK6 330 aaPredicted RBP1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 SLC22A13Q9Y226 551 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 BAHCC1Q9P281 2608 aa1.52□□□□□ -2.17
RNU6-28P-201ENST00000362378 PXDNLA1KZ92 1463 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 WRNQ14191 1432 aaPredicted RBP eCLIP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 TRAV7A0A075B6U4 112 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 A0A0J9YY10 115 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 A0A1B0GX78 115 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 PQLC2LA1A4F0 135 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 RFPL4AA6NLU0 287 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 RFPL4AL1F8VTS6 287 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 J3QQQ9 107 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 CREBL2O60519 120 aaPredicted RBP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 C1QAP02745 245 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 ZNF705DP0CH99 300 aaPredicted RBP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 S100A7P31151 101 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 RPL28P46779 137 aaKnown RBP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 HAAOP46952 286 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 RAB14P61106 215 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 RPL26P61254 145 aaKnown RBP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 CCL7P80098 99 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 RELAQ04206 551 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 FADDQ13158 208 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 GRK1Q15835 563 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 Q6ZS49 121 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 C20orf196Q8IYI0 205 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 KLK6Q92876 244 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 ERMAPQ96PL5 475 aaPredicted RBP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 OR8D2Q9GZM6 311 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 VCX3BQ9H321 246 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 EFCAB1Q9HAE3 211 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 CISHQ9NSE2 258 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 CMTM6Q9NX76 183 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 RPL26L1Q9UNX3 145 aaKnown RBP1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 FUT9Q9Y231 359 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 TIMM9Q9Y5J7 89 aa1.51□□□□□ -2.17
RNU6-28P-201ENST00000362378 DENND4BO75064 1496 aaPredicted RBP1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 ICE1Q9Y2F5 2266 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 TRBV20OR9-2A0A075B6H5 130 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 IGHV1-18A0A0C4DH31 117 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 ZNF705FA8MVS1 300 aaPredicted RBP1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 TMEM114B3SHH9 223 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 H3BT86 120 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 MSMBP08118 114 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 MSNP26038 577 aaKnown RBP1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 SNRPD2P62316 118 aaKnown RBP1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 CCL20P78556 96 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 GLO1Q04760 184 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 SPACA4Q8TDM5 124 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 SLC7A6Q92536 515 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 PRAP1Q96NZ9 151 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 PPP1R2P1Q96PQ5 205 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 KLF6Q99612 283 aaPredicted RBP1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 WDR61Q9GZS3 305 aaKnown RBP1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 IL36BQ9NZH7 164 aa1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 MRPL27Q9P0M9 148 aaKnown RBP1.5□□□□□ -2.17
RNU6-28P-201ENST00000362378 ZFYVE9O95405 1425 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 COL5A3P25940 1745 aaPredicted RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 MTUS2Q5JR59 1369 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 TRAV38-1A0A0B4J264 116 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 SMIM9A6NGZ8 99 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 H7C2G1 150 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 NOS1APO75052 506 aaPredicted RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 HLA-DRB1P01911 266 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 CTXN2P0C2S0 81 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 IFI30P13284 250 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 HLA-DMBP28068 263 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 TMEM258P61165 79 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 HIST1H4AP62805 103 aaKnown RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 RPL18Q07020 188 aaKnown RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 SRSF6Q13247 344 aaKnown RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 ZNF705AQ6ZN79 300 aaPredicted RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 RPP25LQ8N5L8 163 aaKnown RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 MRPL30Q8TCC3 161 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms