RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CORO2AQ92828 525 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 GPR61Q9BZJ8 451 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 LINC00574Q9H8X3 128 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 RAXQ9Y2V3 346 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 TET2Q6N021 2002 aaPredicted RBP18.57■□□□□ 0.56
LDB1-201ENST00000361198 HMGB3O15347 200 aaKnown RBP18.57■□□□□ 0.56
LDB1-201ENST00000361198 NDUFB7P17568 137 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 GNG10P50151 68 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 RPL23P62829 140 aaKnown RBP18.57■□□□□ 0.56
LDB1-201ENST00000361198 ADIRFQ15847 76 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 LYG1Q8N1E2 194 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 NEUROG1Q92886 237 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 RAB24Q969Q5 203 aa18.57■□□□□ 0.56
LDB1-201ENST00000361198 TRAV3A0A0B4J244 114 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 FAM90A9PA6NNJ1 464 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 SHISA9B4DS77 424 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 BSXQ3C1V8 233 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 OR10D4PQ8NGN7 298 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 OR4A16Q8NH70 328 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 ZZEF1O43149 2961 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 TRAV38-1A0A0B4J264 116 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 ERVK-16P61578 105 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 DMRTC2Q8IXT2 367 aaPredicted RBP18.56■□□□□ 0.56
LDB1-201ENST00000361198 Q8N7P7 452 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 OR10A7Q8NGE5 316 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 PARLQ9H300 379 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 SRD5A3Q9H8P0 318 aa18.56■□□□□ 0.56
LDB1-201ENST00000361198 C15orf62A8K5M9 175 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 KIR2DS2P43631 304 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 MRPS11P82912 194 aaKnown RBP18.55■□□□□ 0.56
LDB1-201ENST00000361198 RELBQ01201 579 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 C16orf82Q7Z2V1 217 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 ZNF709Q8N972 641 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.55■□□□□ 0.56
LDB1-201ENST00000361198 CCL17Q92583 94 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 RNASE6Q93091 150 aaKnown RBP18.55■□□□□ 0.56
LDB1-201ENST00000361198 RPUSD4Q96CM3 377 aaKnown RBP18.55■□□□□ 0.56
LDB1-201ENST00000361198 NGBQ9NPG2 151 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 TMEM140Q9NV12 185 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 SLC25A10Q9UBX3 287 aaPredicted RBP18.55■□□□□ 0.56
LDB1-201ENST00000361198 ARFGEF3Q5TH69 2177 aa18.55■□□□□ 0.56
LDB1-201ENST00000361198 NKX6-3A6NJ46 265 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 E7EQL1 145 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 TMEM178BH3BS89 294 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 FCN3O75636 299 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 OR51G1Q8NGK1 321 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 OR4S2Q8NH73 311 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 hADV38S2A0JD32 116 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 LY86O95711 162 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 FAM209BQ5JX69 171 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 DNLZQ5SXM8 178 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 ZNF383Q8NA42 475 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 RPUSD1Q9UJJ7 312 aaKnown RBP18.54■□□□□ 0.56
LDB1-201ENST00000361198 NBASA2RRP1 2371 aa18.54■□□□□ 0.56
LDB1-201ENST00000361198 VSTM5A8MXK1 200 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 C17orf112F2Z3M2 114 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 SPCS3P61009 180 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 GATAD1Q8WUU5 269 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 PITPNC1Q9UKF7 332 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 LINC00312Q9Y6C7 94 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 PPIAL4EA0A075B759 164 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 PPIAL4DF5H284 164 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 PPIAL4FP0DN26 164 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 TMEM249Q2WGJ8 235 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 OR4F5Q8NH21 305 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 OR4F4Q96R69 305 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 ZNRD1Q9P1U0 126 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 WDR83OSQ9Y284 106 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 PPIAL4AQ9Y536 164 aa18.53■□□□□ 0.56
LDB1-201ENST00000361198 THBS3P49746 956 aa18.52■□□□□ 0.56
LDB1-201ENST00000361198 C4orf17Q53FE4 359 aa18.52■□□□□ 0.56
LDB1-201ENST00000361198 OR4X1Q8NH49 305 aa18.52■□□□□ 0.56
LDB1-201ENST00000361198 TMEM106BQ9NUM4 274 aa18.52■□□□□ 0.56
LDB1-201ENST00000361198 ATRXP46100 2492 aa18.52■□□□□ 0.56
LDB1-201ENST00000361198 RPL31P62899 125 aaKnown RBP18.52■□□□□ 0.55
LDB1-201ENST00000361198 ACOT6Q3I5F7 207 aaPredicted RBP18.52■□□□□ 0.55
LDB1-201ENST00000361198 CDPF1Q6NVV7 123 aa18.52■□□□□ 0.55
LDB1-201ENST00000361198 SLC25A48Q6ZT89 311 aaKnown RBP18.52■□□□□ 0.55
LDB1-201ENST00000361198 OR52E5Q8NH55 327 aa18.52■□□□□ 0.55
LDB1-201ENST00000361198 RHOVQ96L33 236 aa18.52■□□□□ 0.55
LDB1-201ENST00000361198 SMCO3A2RU48 225 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 VENTXO95231 258 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 HIST1H1BP16401 226 aaKnown RBP18.51■□□□□ 0.55
LDB1-201ENST00000361198 ZCCHC14Q8WYQ9 949 aaKnown RBP18.51■□□□□ 0.55
LDB1-201ENST00000361198 H7BYZ3 331 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 SOX15O60248 233 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 PAGE4O60829 102 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 UCNP55089 124 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 PDZD11Q5EBL8 140 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 ANAPC16Q96DE5 110 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 NEIL1Q96FI4 390 aaPredicted RBP18.51■□□□□ 0.55
LDB1-201ENST00000361198 DYNLRB1Q9NP97 96 aa18.51■□□□□ 0.55
LDB1-201ENST00000361198 CD1BP29016 333 aa18.5■□□□□ 0.55
LDB1-201ENST00000361198 VDAC2P45880 294 aaPredicted RBP18.5■□□□□ 0.55
LDB1-201ENST00000361198 CDC34P49427 236 aaPredicted RBP18.5■□□□□ 0.55
LDB1-201ENST00000361198 TMEM30BQ3MIR4 351 aa18.5■□□□□ 0.55
LDB1-201ENST00000361198 PDLIM3Q53GG5 364 aaPredicted RBP18.5■□□□□ 0.55
LDB1-201ENST00000361198 LYPD2Q6UXB3 125 aa18.5■□□□□ 0.55
LDB1-201ENST00000361198 RAB1CQ92928 201 aa18.5■□□□□ 0.55
LDB1-201ENST00000361198 IFNA10P01566 189 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms