RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 HTD2P86397 168 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 PMS2P11Q13670 270 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 CALYQ9NYX4 217 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 TCF19Q9Y242 345 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 RELBQ01201 579 aa16.87■□□□□ 0.29
COL13A1-202ENST00000357811 IL3RAP26951 378 aa16.87■□□□□ 0.29
COL13A1-202ENST00000357811 C22orf34Q6ZV56 151 aa16.87■□□□□ 0.29
COL13A1-202ENST00000357811 GGTLC1Q9BX51 225 aa16.87■□□□□ 0.29
COL13A1-202ENST00000357811 PLSCR4Q9NRQ2 329 aa16.87■□□□□ 0.29
COL13A1-202ENST00000357811 TP53TG5Q9Y2B4 290 aa16.87■□□□□ 0.29
COL13A1-202ENST00000357811 IGLV1-44P01699 117 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 FTH1P19P0C7X4 201 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 SFTPCP11686 197 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 CT45A1Q5HYN5 189 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 ZCCHC24Q8N2G6 241 aaKnown RBP16.86■□□□□ 0.29
COL13A1-202ENST00000357811 CT45A3Q8NHU0 189 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 ZGRF1Q86YA3 2104 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 SAA2-SAA4A0A096LPE2 208 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 MGST3O14880 152 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 SAA2P0DJI9 122 aaPredicted RBP16.86■□□□□ 0.29
COL13A1-202ENST00000357811 GZMBP10144 247 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 GATA2P23769 480 aaPredicted RBP16.86■□□□□ 0.29
COL13A1-202ENST00000357811 NUTF2P61970 127 aaKnown RBP16.86■□□□□ 0.29
COL13A1-202ENST00000357811 SGMS2Q8NHU3 365 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 PYGO2Q9BRQ0 406 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 ZNF292O60281 2723 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 EREGO14944 169 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 SLC25A15Q9Y619 301 aa16.86■□□□□ 0.29
COL13A1-202ENST00000357811 MMP23AO75900 390 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 VDAC2P45880 294 aaPredicted RBP16.85■□□□□ 0.29
COL13A1-202ENST00000357811 MBNL2Q5VZF2 373 aaKnown RBP16.85■□□□□ 0.29
COL13A1-202ENST00000357811 FAM90A1Q86YD7 464 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 ZNF664Q8N3J9 261 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 LOXL4Q96JB6 756 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 YTHDF2Q9Y5A9 579 aaKnown RBP16.85■□□□□ 0.29
COL13A1-202ENST00000357811 SPTA1P02549 2419 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 A8MWP6 167 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 CD33P20138 364 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 ARSJQ5FYB0 599 aaPredicted RBP16.85■□□□□ 0.29
COL13A1-202ENST00000357811 ZNF474Q6S9Z5 364 aaPredicted RBP16.85■□□□□ 0.29
COL13A1-202ENST00000357811 RND1Q92730 232 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 CCL13Q99616 98 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 JPT1Q9UK76 154 aa16.85■□□□□ 0.29
COL13A1-202ENST00000357811 NAV3Q8IVL0 2385 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 SLC17A3O00476 420 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 LBHQ53QV2 105 aaPredicted RBP16.84■□□□□ 0.29
COL13A1-202ENST00000357811 C1orf159Q96HA4 380 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 CEP295Q9C0D2 2601 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 TGOLN2O43493 480 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 MLANAQ16655 118 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 MRPL41Q8IXM3 137 aaKnown RBP16.84■□□□□ 0.29
COL13A1-202ENST00000357811 FAM216BQ8N7L0 139 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 ANAPC16Q96DE5 110 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 APC2O95996 2303 aa16.84■□□□□ 0.29
COL13A1-202ENST00000357811 GRIFINA4D1Z8 144 aa16.83■□□□□ 0.29
COL13A1-202ENST00000357811 OR4A47Q6IF82 309 aa16.83■□□□□ 0.29
COL13A1-202ENST00000357811 AHRRA9YTQ3 701 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 KLF3P57682 345 aaPredicted RBP16.83■□□□□ 0.28
COL13A1-202ENST00000357811 RAB4BP61018 213 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 RELQ04864 619 aaPredicted RBP16.83■□□□□ 0.28
COL13A1-202ENST00000357811 TMEM256Q8N2U0 113 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 C1orf162Q8NEQ5 155 aaPredicted RBP16.83■□□□□ 0.28
COL13A1-202ENST00000357811 IMMP2LQ96T52 175 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 TRAPPC1Q9Y5R8 145 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 SPINK4O60575 86 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 CA2P00918 260 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 CGAP01215 116 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 IL6RP08887 468 aaPredicted RBP16.83■□□□□ 0.28
COL13A1-202ENST00000357811 IGFBP2P18065 325 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 ASPHD1Q5U4P2 390 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 KCNIP4Q6PIL6 250 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 TCTEX1D1Q8N7M0 179 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 STPG3Q8N7X2 389 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 OR4P4Q8NGL7 312 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 OCC1Q8TAD7 63 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 LRFN3Q9BTN0 628 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 ASCL3Q9NQ33 180 aa16.83■□□□□ 0.28
COL13A1-202ENST00000357811 F6UZH7 168 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 YPEL1O60688 119 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 C17orf58Q2M2W7 97 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 PPP1R35Q8TAP8 253 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 FAM216AQ8WUB2 273 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 YPEL2Q96QA6 119 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 NUPR1O60356 82 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 IGKV1-16P04430 117 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 FRMD6-AS1P0C7T7 363 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 ZNF25P17030 456 aaPredicted RBP16.82■□□□□ 0.28
COL13A1-202ENST00000357811 FAM27E3Q08E93 113 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 ACTL10Q5JWF8 245 aa16.82■□□□□ 0.28
COL13A1-202ENST00000357811 ZNF891A8MT65 544 aaPredicted RBP16.81■□□□□ 0.28
COL13A1-202ENST00000357811 PDE6DO43924 150 aa16.81■□□□□ 0.28
COL13A1-202ENST00000357811 HLA-DRB5Q30154 266 aa16.81■□□□□ 0.28
COL13A1-202ENST00000357811 SFRP2Q96HF1 295 aa16.81■□□□□ 0.28
COL13A1-202ENST00000357811 NDUFAF3Q9BU61 184 aa16.81■□□□□ 0.28
COL13A1-202ENST00000357811 PARD6AQ9NPB6 346 aa16.81■□□□□ 0.28
COL13A1-202ENST00000357811 GGCTO75223 188 aaKnown RBP16.81■□□□□ 0.28
COL13A1-202ENST00000357811 NPY1RP25929 384 aa16.81■□□□□ 0.28
COL13A1-202ENST00000357811 PCP4P48539 62 aa16.81■□□□□ 0.28
COL13A1-202ENST00000357811 MRPS11P82912 194 aaKnown RBP16.81■□□□□ 0.28
COL13A1-202ENST00000357811 SLC24A4Q8NFF2 622 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms