RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 CCL19Q99731 98 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 NPDC1Q9NQX5 325 aaPredicted RBP13.68□□□□□ -0.22
RXRA-201ENST00000356384 TNS1Q9HBL0 1735 aaKnown RBP13.67□□□□□ -0.22
RXRA-201ENST00000356384 PIN1P1O15428 100 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 ITLN2Q8WWU7 325 aaPredicted RBP13.67□□□□□ -0.22
RXRA-201ENST00000356384 SCGB3A1Q96QR1 104 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 DMRT1Q9Y5R6 373 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 TMEM250H0YL14 139 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 H7C1H1 209 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 SYNGR3O43761 229 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 ATP1A1-AS1Q5TC04 95 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 APOHP02749 345 aaPredicted RBP13.67□□□□□ -0.22
RXRA-201ENST00000356384 HOXB1P14653 301 aaPredicted RBP13.67□□□□□ -0.22
RXRA-201ENST00000356384 NUTF2P61970 127 aaKnown RBP13.67□□□□□ -0.22
RXRA-201ENST00000356384 GGACTQ9BVM4 153 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 CD69Q07108 199 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 C2orf88Q9BSF0 95 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 G6PC2Q9NQR9 355 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 TRPM6Q9BX84 2022 aa13.67□□□□□ -0.22
RXRA-201ENST00000356384 DOCK5Q9H7D0 1870 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 ZNF600Q6ZNG1 722 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 ZNRF1Q8ND25 227 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 OR11H4Q8NGC9 324 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 HOXA5P20719 270 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 PRSS53Q2L4Q9 553 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 DUX3Q96PT4 197 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 HS3ST3B1Q9Y662 390 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 KIAA1217Q5T5P2 1943 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 KLF4O43474 513 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 CYB5R2Q6BCY4 276 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 POC1AQ8NBT0 407 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 TRBV7-9A0A0J9YWB2 115 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 SLC17A3O00476 420 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 Q5BKY6 102 aa13.66□□□□□ -0.22
RXRA-201ENST00000356384 APOMO95445 188 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 FGF5P12034 268 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 TYMSP04818 313 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 LINC01560Q8TB33 94 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 MCM3APO60318 1980 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 HTN3P15516 51 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 TEX45Q8NA69 505 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 CGAP01215 116 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 IMMP2LQ96T52 175 aa13.65□□□□□ -0.22
RXRA-201ENST00000356384 FOXA2Q9Y261 457 aaPredicted RBP13.65□□□□□ -0.22
RXRA-201ENST00000356384 NBEAP1P0C6P0 100 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 LINC00518Q8N0U6 118 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 OR5AN1Q8NGI8 311 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 FOXH1O75593 365 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 NEUROG1Q92886 237 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 AICDAQ9GZX7 198 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 SCARF2Q96GP6 870 aaPredicted RBP13.64□□□□□ -0.23
RXRA-201ENST00000356384 SPAG8Q99932 426 aaPredicted RBP13.64□□□□□ -0.23
RXRA-201ENST00000356384 H3BRM9 83 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 PEX7O00628 323 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 GCM2O75603 506 aaPredicted RBP13.64□□□□□ -0.23
RXRA-201ENST00000356384 SLC25A45Q8N413 288 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 FBXL15Q9H469 300 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 COX5BP10606 129 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 NPCDR1Q9BY65 106 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 NPFFR1Q9GZQ6 430 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 SEMA5BQ9P283 1151 aa13.64□□□□□ -0.23
RXRA-201ENST00000356384 IGHV3OR16-8A0A075B7F1 116 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 TMEM30BQ3MIR4 351 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 TMEM74BQ9NUR3 256 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 NDUFA3O95167 84 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 COX6A1P12074 109 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 ZNF708P17019 499 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 OR5P3Q8WZ94 311 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 GPX4P36969 197 aaPredicted RBP13.63□□□□□ -0.23
RXRA-201ENST00000356384 ASPHD2Q6ICH7 369 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 RNASEH2CQ8TDP1 164 aaKnown RBP13.63□□□□□ -0.23
RXRA-201ENST00000356384 MBD3L1Q8WWY6 194 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 FBXL7Q9UJT9 491 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 A0A1B0GV72 72 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 TDGF1P13385 188 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 CNTFRP26992 372 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 UCP3P55916 312 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 STARD6P59095 220 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 NHLRC3Q5JS37 347 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 PSMG3Q9BT73 122 aaPredicted RBP13.63□□□□□ -0.23
RXRA-201ENST00000356384 SCN1AP35498 2009 aa13.63□□□□□ -0.23
RXRA-201ENST00000356384 PRR19A6NJB7 356 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 ATP5LO75964 103 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 IGFBP2P18065 325 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 IFI27L2Q9H2X8 130 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 RPRMQ9NS64 109 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 ZNF318Q5VUA4 2279 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 TBR1Q16650 682 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 TCF23Q7RTU1 214 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 RCC1LQ96I51 464 aaKnown RBP13.62□□□□□ -0.23
RXRA-201ENST00000356384 IGKV3D-20A0A0C4DH25 116 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 WISP3O95389 354 aaPredicted RBP13.62□□□□□ -0.23
RXRA-201ENST00000356384 RNASE4P34096 147 aaKnown RBP13.62□□□□□ -0.23
RXRA-201ENST00000356384 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
RXRA-201ENST00000356384 B9A039 149 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 CFAP161Q6P656 301 aa13.62□□□□□ -0.23
RXRA-201ENST00000356384 CD200R1LQ6Q8B3 271 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms