RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 CXorf58Q96LI9 332 aa8.06□□□□□ -1.12
CAPN3-204ENST00000356316 COMMD5Q9GZQ3 224 aa8.06□□□□□ -1.12
CAPN3-204ENST00000356316 SLC5A7Q9GZV3 580 aa8.06□□□□□ -1.12
CAPN3-204ENST00000356316 TNCP24821 2201 aa8.06□□□□□ -1.12
CAPN3-204ENST00000356316 TENM2Q9NT68 2774 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 E7EUB6 86 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 SULT1C2O00338 296 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 ATP6V1G2O95670 118 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 HPRT1P00492 218 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 PPYP01298 95 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 REG1AP05451 166 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 CLEC3BP05452 202 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 CD7P09564 240 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 PTHLHP12272 177 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 AREGP15514 252 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 NQO2P16083 231 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 CBX5P45973 191 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 TAS2R31P59538 309 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 FXYD4P59646 89 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 HERV-K104P61576 105 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 EIF4EBP1Q13541 118 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-204ENST00000356316 ZNF57Q68EA5 555 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-204ENST00000356316 ZNF773Q6PK81 442 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 DEFB125Q8N687 156 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 GVQW1Q8N7I0 195 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 DMBX1Q8NFW5 382 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 CD300LFQ8TDQ1 290 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 S100A16Q96FQ6 103 aaKnown RBP8.05□□□□□ -1.12
CAPN3-204ENST00000356316 GPHA2Q96T91 129 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 HIPK2Q9H2X6 1198 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 SRD5A3Q9H8P0 318 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 BET1LQ9NYM9 111 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 S4R3C0 116 aa8.05□□□□□ -1.12
CAPN3-204ENST00000356316 RBFOX2O43251 390 aaKnown RBP eCLIP8.04□□□□□ -1.121e-6■■■■■ 32.4
CAPN3-204ENST00000356316 TMEM127O75204 238 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 FCER2P06734 321 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 CLEC2LP0C7M8 214 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 CTRB1P17538 263 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 BRWD1-AS2P59051 145 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 CTRB2Q6GPI1 263 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 ADAMTSL5Q6ZMM2 481 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 LINC00322Q6ZN03 302 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-204ENST00000356316 RBPMS2Q6ZRY4 209 aaKnown RBP8.04□□□□□ -1.12
CAPN3-204ENST00000356316 CROCCP3Q8IVE0 287 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 UXS1Q8NBZ7 420 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 OR5AP2Q8NGF4 316 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 OR52B4Q8NGK2 314 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 OR5H6Q8NGV6 325 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 GIMAP1Q8WWP7 306 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 WDR89Q96FK6 387 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-204ENST00000356316 FANCD2OSQ96PS1 177 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 AUNIPQ9H7T9 357 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 IFT46Q9NQC8 304 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 GAR1Q9NY12 217 aaKnown RBP8.04□□□□□ -1.12
CAPN3-204ENST00000356316 DMRT1Q9Y5R6 373 aa8.04□□□□□ -1.12
CAPN3-204ENST00000356316 RBMY1BA6NDE4 496 aaKnown RBP8.03□□□□□ -1.12
CAPN3-204ENST00000356316 RBMY1EA6NEQ0 496 aaKnown RBP8.03□□□□□ -1.12
CAPN3-204ENST00000356316 JTBO76095 146 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 RBMY1DP0C7P1 496 aaKnown RBP8.03□□□□□ -1.12
CAPN3-204ENST00000356316 OR2B8PP59922 312 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 ERVK-16P61578 105 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 NEDD8Q15843 81 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 TIMM50Q3ZCQ8 353 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 AADACL3Q5VUY0 350 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 PLET1Q6UQ28 207 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 C19orf35Q6ZS72 473 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 TSPAN14Q8NG11 270 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 OR51H1Q8NH63 302 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 MARC2Q969Z3 335 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 FAM110AQ9BQ89 295 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 SRSF8Q9BRL6 282 aaKnown RBP8.03□□□□□ -1.12
CAPN3-204ENST00000356316 PLEKHA2Q9HB19 425 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 RETNQ9HD89 108 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 ZC4H2Q9NQZ6 224 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 CSMD3Q7Z407 3707 aa8.03□□□□□ -1.12
CAPN3-204ENST00000356316 IGLV11-55A0A075B6I3 123 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 UPK2O00526 184 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 XRCC3O43542 346 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 SCAF4O95104 1147 aaKnown RBP8.02□□□□□ -1.13
CAPN3-204ENST00000356316 TRAPPC2P0DI81 140 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 TRAPPC2BP0DI82 140 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 MYOD1P15172 320 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 EDN2P20800 178 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 ZNF585BQ52M93 769 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 THOC7Q6I9Y2 204 aaKnown RBP8.02□□□□□ -1.13
CAPN3-204ENST00000356316 SLC25A24Q6NUK1 477 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 HSD17B13Q7Z5P4 300 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-204ENST00000356316 TMEM17Q86X19 198 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 CMTM1Q8IZ96 169 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 SLC38A6Q8IZM9 456 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 CACNG8Q8WXS5 425 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 SLC25A38Q96DW6 304 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 CCDC140Q96MF4 163 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 QTRT1Q9BXR0 403 aaKnown RBP8.02□□□□□ -1.13
CAPN3-204ENST00000356316 RNF167Q9H6Y7 350 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 TMEM140Q9NV12 185 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 EHFQ9NZC4 300 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 MRPL27Q9P0M9 148 aaKnown RBP8.02□□□□□ -1.13
CAPN3-204ENST00000356316 UFC1Q9Y3C8 167 aa8.02□□□□□ -1.13
CAPN3-204ENST00000356316 SELENOKQ9Y6D0 94 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms