RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZNF831Q5JPB2 1677 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 CACNA1HO95180 2353 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 CDCP2Q5VXM1 449 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 C9orf40Q8IXQ3 194 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 CHST5Q9GZS9 411 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 TRAV8-2A0A0B4J237 113 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 CGB3P0DN86 165 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 HOXA5P20719 270 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 FDCSPQ8NFU4 85 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 MRPL20Q9BYC9 149 aaKnown RBP14.78□□□□□ -0.04
COL27A1-201ENST00000356083 TMEM127O75204 238 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 P2RY6Q15077 328 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 COLCA1Q6ZS62 124 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 A0A0J9YW62 118 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 FGFRL1Q8N441 504 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 PSMG3Q9BT73 122 aaPredicted RBP14.78□□□□□ -0.04
COL27A1-201ENST00000356083 ATG4DQ86TL0 474 aaPredicted RBP14.77□□□□□ -0.04
COL27A1-201ENST00000356083 CD33P20138 364 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 RFLNBQ8N5W9 214 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 ST6GALNAC6Q969X2 333 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 SPG11Q96JI7 2443 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 HMSDA8MTL9 139 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 LINC00158P58513 81 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 MARS2Q96GW9 593 aaKnown RBP14.77□□□□□ -0.04
COL27A1-201ENST00000356083 FBXL15Q9H469 300 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 PEMTQ9UBM1 199 aa14.77□□□□□ -0.04
COL27A1-201ENST00000356083 PTPRQQ9UMZ3 2332 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 FOXA3P55318 350 aaPredicted RBP14.77□□□□□ -0.05
COL27A1-201ENST00000356083 FGF12P61328 243 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 DTX2Q86UW9 622 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 OR11H12B2RN74 326 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 KLK8O60259 260 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 HOXD4P09016 255 aaPredicted RBP14.77□□□□□ -0.05
COL27A1-201ENST00000356083 OR11H1Q8NG94 326 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 OR11H2Q8NH07 326 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 NRIP2Q9BQI9 281 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 CHCHD5Q9BSY4 110 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 SLC25A15Q9Y619 301 aa14.77□□□□□ -0.05
COL27A1-201ENST00000356083 A0A0G2JLM5 398 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 NDUFA2O43678 99 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 IGLV3-25P01717 112 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 PLPPR5Q32ZL2 321 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 MZB1Q8WU39 189 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 SCARF2Q96GP6 870 aaPredicted RBP14.76□□□□□ -0.05
COL27A1-201ENST00000356083 DSPPQ9NZW4 1301 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 IGHV3-73A0A0B4J1V6 119 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 ADARB2-AS1A8MUL3 147 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 LILRA1O75019 489 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 LY6DQ14210 128 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 SLC25A34Q6PIV7 304 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 OR2K2Q8NGT1 345 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 KLF14Q8TD94 323 aaPredicted RBP14.76□□□□□ -0.05
COL27A1-201ENST00000356083 VCX2Q9H322 139 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 JPT2Q9H910 190 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 ASAH2BP0C7U1 165 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 OR4D11Q8NGI4 311 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 CISD3P0C7P0 127 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 GCSAMQ8N6F7 178 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 FBXL7Q9UJT9 491 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 A0A1B0GWB2 263 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 CA1P00915 261 aaPredicted RBP14.76□□□□□ -0.05
COL27A1-201ENST00000356083 HIST1H4AP62805 103 aaKnown RBP14.76□□□□□ -0.05
COL27A1-201ENST00000356083 METRNQ9UJH8 293 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 LHBP01229 141 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 BGLAPP02818 100 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 VN1R4Q7Z5H5 301 aa14.76□□□□□ -0.05
COL27A1-201ENST00000356083 SMRP1Q8NCR6 262 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 C14orf144Q96I85 54 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 SPINT1O43278 529 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 C1QL1O75973 258 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 APOBEC3AP31941 199 aaPredicted RBP14.75□□□□□ -0.05
COL27A1-201ENST00000356083 H1FOOQ8IZA3 346 aaPredicted RBP14.75□□□□□ -0.05
COL27A1-201ENST00000356083 OR10S1Q8NGN2 331 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 SLIRPQ9GZT3 109 aaKnown RBP14.75□□□□□ -0.05
COL27A1-201ENST00000356083 IGHV1-45A0A0A0MS14 117 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 TMEM249Q2WGJ8 235 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 ZPLD1Q8TCW7 415 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 ZG16O60844 167 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 SRSF6Q13247 344 aaKnown RBP14.75□□□□□ -0.05
COL27A1-201ENST00000356083 ZAR1Q86SH2 424 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 RTN4RL2Q86UN3 420 aa14.75□□□□□ -0.05
COL27A1-201ENST00000356083 A0A087WX48 190 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 CDKN1AP38936 164 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 ZNF385CQ66K41 422 aaPredicted RBP14.74□□□□□ -0.05
COL27A1-201ENST00000356083 TMEM167AQ8TBQ9 72 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 TMEM45BQ96B21 275 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 MARCH11A6NNE9 402 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 C8orf88P0DMB2 117 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 C3orf56Q8N813 242 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 WNT2BQ93097 391 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 KCNK7Q9Y2U2 307 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 A0A1W2PP11 408 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 LINC00614P0C842 121 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 GP6Q9HCN6 339 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 EVI2AP22794 236 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 GLIPR1P48060 266 aa14.74□□□□□ -0.05
COL27A1-201ENST00000356083 TRAV2A0A0B4J234 112 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 BCL2P10415 239 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 FXYD7P58549 80 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 MEF2BQ02080 365 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms