RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 IGHV3OR16-13A0A075B7E8 117 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 IGHV3-74A0A0B4J1X5 117 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 TMEM14DPA8MWL7 114 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 IFI6P09912 130 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 ZNF708P17019 499 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
LMX1B-201ENST00000355497 MARVELD3Q96A59 401 aa12.65□□□□□ -0.38
LMX1B-201ENST00000355497 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.39
LMX1B-201ENST00000355497 CGAP01215 116 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 TDGF1P13385 188 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 CITED2Q99967 270 aaPredicted RBP12.64□□□□□ -0.39
LMX1B-201ENST00000355497 CLDN16Q9Y5I7 305 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 ITGB4P16144 1822 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 B9A039 149 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 ELOVL5Q9NYP7 299 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 TOMM7Q9P0U1 55 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 NDUFA3O95167 84 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 ST6GALNAC6Q969X2 333 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 LOC390937A0A1W2PQ73 354 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 SLC17A3O00476 420 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 CD8AP01732 235 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 COX6A1P12074 109 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 PRSS53Q2L4Q9 553 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 ANAPC13Q9BS18 74 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 PRRC2BQ5JSZ5 2229 aaKnown RBP12.64□□□□□ -0.39
LMX1B-201ENST00000355497 A0A1B0GUT8 65 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 GHRHP01286 108 aa12.64□□□□□ -0.39
LMX1B-201ENST00000355497 RCC1LQ96I51 464 aaKnown RBP12.64□□□□□ -0.39
LMX1B-201ENST00000355497 TRAV12-3A0A0B4J271 114 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 GPR183P32249 361 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 ITLN2Q8WWU7 325 aaPredicted RBP12.63□□□□□ -0.39
LMX1B-201ENST00000355497 TRAV8-4A0A0B4J246 113 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 APOMO95445 188 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 CRYBA2P53672 197 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 EFNB1P98172 346 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 PSMG4Q5JS54 123 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 OR2K2Q8NGT1 345 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 FOXA2Q9Y261 457 aaPredicted RBP12.63□□□□□ -0.39
LMX1B-201ENST00000355497 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
LMX1B-201ENST00000355497 STARD6P59095 220 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 LOXL4Q96JB6 756 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 IMMP2LQ96T52 175 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 SCO2A0A1W2PP80 73 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 J3QW42 95 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 PAX1P15863 534 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 SSBP4Q9BWG4 385 aaPredicted RBP12.63□□□□□ -0.39
LMX1B-201ENST00000355497 TMEM50AO95807 157 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 IGFBP2P18065 325 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 IFITM2Q01629 132 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 TFF3Q07654 80 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 CDCP2Q5VXM1 449 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 FBXL7Q9UJT9 491 aa12.63□□□□□ -0.39
LMX1B-201ENST00000355497 Q6AWC8 147 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 OSR1Q8TAX0 266 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-201ENST00000355497 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-201ENST00000355497 WFDC6Q9BQY6 131 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 MALP21145 153 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 PAX2Q02962 417 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 Q5BKY6 102 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-201ENST00000355497 TNRC6CQ9HCJ0 1690 aaKnown RBP12.62□□□□□ -0.39
LMX1B-201ENST00000355497 IGHV3-49A0A0A0MS15 119 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 CKS1BP61024 79 aa12.62□□□□□ -0.39
LMX1B-201ENST00000355497 IZUMO1RA6ND01 250 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 IGKV1D-42A0A075B6H8 117 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 MUC21A0A0G2JKD1 596 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 MUC21A0A140T8X8 626 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 MUC21Q5SSG8 566 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 CARHSP1Q9Y2V2 147 aaKnown RBP12.61□□□□□ -0.39
LMX1B-201ENST00000355497 HS3ST3B1Q9Y662 390 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 ACP7Q6ZNF0 438 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 CIARTQ8N365 385 aaPredicted RBP12.61□□□□□ -0.39
LMX1B-201ENST00000355497 FER1L6-AS1Q8NA97 138 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 NXT2Q9NPJ8 142 aaKnown RBP12.61□□□□□ -0.39
LMX1B-201ENST00000355497 RPRMQ9NS64 109 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 A0A0G2JLM5 398 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 LEPP41159 167 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 S4R3C0 116 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 ZNRF1Q8ND25 227 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 OR52E5Q8NH55 327 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 LINC01587Q99440 93 aa12.61□□□□□ -0.39
LMX1B-201ENST00000355497 KLF4O43474 513 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 FHL5Q5TD97 284 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 PPP1R27Q86WC6 154 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 PAPPAQ13219 1627 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
LMX1B-201ENST00000355497 RTN4RL2Q86UN3 420 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 ORMDL3Q8N138 153 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 KIR3DL3Q8N743 410 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 TM4SF5O14894 197 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 APOBEC3AP31941 199 aaPredicted RBP12.6□□□□□ -0.39
LMX1B-201ENST00000355497 TGIF1Q15583 401 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
LMX1B-201ENST00000355497 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms