RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 IFNA5P01569 189 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 CD5P06127 495 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 SAA2P0DJI9 122 aaPredicted RBP6.66□□□□□ -1.34
CD44-205ENST00000352818 DAOP14920 347 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 CAMLGP49069 296 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 ERVK-16P61578 105 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 ATP6V1FQ16864 119 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 LTC4SQ16873 150 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 IZUMO4Q1ZYL8 232 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 LRRC10Q5BKY1 277 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 CT45A1Q5HYN5 189 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 SAMD5Q5TGI4 173 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 DHRS7BQ6IAN0 325 aaPredicted RBP6.66□□□□□ -1.34
CD44-205ENST00000352818 HEPN1Q6WQI6 88 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 LINC00311Q8N616 119 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 HSD17B11Q8NBQ5 300 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 DEFB108BQ8NET1 73 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 CT45A3Q8NHU0 189 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 ZNF596Q8TC21 504 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 RBMXL1Q96E39 390 aaKnown RBP6.66□□□□□ -1.34
CD44-205ENST00000352818 S1PR3Q99500 378 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 ZNF251Q9BRH9 671 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 SH3BGRL3Q9H299 93 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 HRH4Q9H3N8 390 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 C19orf12Q9NSK7 152 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 ARFGEF3Q5TH69 2177 aa6.66□□□□□ -1.34
CD44-205ENST00000352818 A0A087X0M5 115 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 TRBV23-1A0A0A0MS06 115 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 A0A1B0GX30 115 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 M0QZ24 198 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 SLC31A2O15432 143 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 NDUFB3O43676 98 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 NXPH3O95157 252 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 ARG1P05089 322 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 IAPPP10997 89 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 NQO2P16083 231 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 NDUFB7P17568 137 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 OMGP23515 440 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 SNCAP37840 140 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 SPCS3P61009 180 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 RPL31P62899 125 aaKnown RBP6.65□□□□□ -1.34
CD44-205ENST00000352818 MRPS11P82912 194 aaKnown RBP6.65□□□□□ -1.34
CD44-205ENST00000352818 TAGLNQ01995 201 aaKnown RBP6.65□□□□□ -1.34
CD44-205ENST00000352818 TMEM267Q0VDI3 215 aaPredicted RBP6.65□□□□□ -1.34
CD44-205ENST00000352818 VWC2Q2TAL6 325 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 RPL39P5Q59GN2 51 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 OR2B11Q5JQS5 317 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 TMEM182Q6ZP80 229 aaPredicted RBP6.65□□□□□ -1.34
CD44-205ENST00000352818 ZNF833PQ6ZTB9 187 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 HAPLN4Q86UW8 402 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 ZNF429Q86V71 674 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 OR2G3Q8NGZ4 309 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 DTD1Q8TEA8 209 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 C22orf15Q8WYQ4 148 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 TMEM186Q96B77 213 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 ZNF714Q96N38 554 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 SEC11CQ9BY50 192 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 SMDT1Q9H4I9 107 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 UQCC1Q9NVA1 299 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 TIMM9Q9Y5J7 89 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.34
CD44-205ENST00000352818 TRAV1-1A0A0B4J248 108 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 PMS2P5A8MQ11 134 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 H3BP45 60 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 GPR37O15354 613 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 FCN3O75636 299 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 RBP4P02753 201 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 OR9G9P0C7N8 305 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 METTL15P1P0C7V9 234 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 ADCYAP1P18509 176 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 PRTN3P24158 256 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 DLX6P56179 175 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 RPP30P78346 268 aaKnown RBP6.64□□□□□ -1.35
CD44-205ENST00000352818 SERF2P84101 59 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 RELBQ01201 579 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 SLC38A11Q08AI6 406 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 ARL16Q0P5N6 197 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 SCGB2A2Q13296 93 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 ZNF273Q14593 569 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 LRRC75BQ2VPJ9 315 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 HFEQ30201 348 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 TMEM155Q4W5P6 130 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 SPANXN5Q5MJ07 72 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 PRAMEF5Q5TYX0 476 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 RUSC1-AS1Q66K80 236 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 CENPVQ7Z7K6 275 aaPredicted RBP6.64□□□□□ -1.35
CD44-205ENST00000352818 ZCCHC24Q8N2G6 241 aaKnown RBP6.64□□□□□ -1.35
CD44-205ENST00000352818 SVBPQ8N300 66 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 LILRB2Q8N423 598 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 TMEM217Q8N7C4 229 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 SUN5Q8TC36 379 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 CCL17Q92583 94 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 PINX1Q96BK5 328 aaKnown RBP6.64□□□□□ -1.35
CD44-205ENST00000352818 NARS2Q96I59 477 aaKnown RBP6.64□□□□□ -1.35
CD44-205ENST00000352818 OR4C12Q96R67 309 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 AIFM2Q9BRQ8 373 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 PBDC1Q9BVG4 233 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 LPAR2Q9HBW0 351 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 TREM1Q9NP99 234 aa6.64□□□□□ -1.35
CD44-205ENST00000352818 CTSZQ9UBR2 303 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms