RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PMCHL2Q9BQD1 86 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 SAP30LQ9HAJ7 183 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 ZNF207O43670 478 aaKnown RBP11.02□□□□□ -0.64
IFT88-202ENST00000351808 SMIM17P0DL12 118 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 SEC11AP67812 179 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 SLC35E4Q6ICL7 350 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 ZNF788Q6ZQV5 615 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 SHISA6Q6ZSJ9 500 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 FAM168AQ92567 244 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 TMEM191AQ9H0A3 160 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 KLRF1Q9NZS2 232 aa11.02□□□□□ -0.64
IFT88-202ENST00000351808 IGHV3-15A0A0B4J1V0 119 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 IZUMO1RA6ND01 250 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 HIST1H1EP10412 219 aaKnown RBP11.02□□□□□ -0.65
IFT88-202ENST00000351808 SPINK2P20155 84 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 FBLP22087 321 aaKnown RBP11.02□□□□□ -0.65
IFT88-202ENST00000351808 RAB30Q15771 203 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 PDLIM3Q53GG5 364 aaPredicted RBP11.02□□□□□ -0.65
IFT88-202ENST00000351808 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
IFT88-202ENST00000351808 TMEM251Q8N6I4 163 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 SPSB4Q96A44 273 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.02□□□□□ -0.65
IFT88-202ENST00000351808 ZNF391Q9UJN7 358 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 HILPDAQ9Y5L2 63 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 A0A0G2JLM5 398 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 A0A0G2JMM0 328 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 A0A1W2PPB8 328 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 KIR3DP1A8MWS1 328 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 H3BRM9 83 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 MFAP2P55001 183 aa11.02□□□□□ -0.65
IFT88-202ENST00000351808 PHF7Q9BWX1 381 aaPredicted RBP11.02□□□□□ -0.65
IFT88-202ENST00000351808 TSSC4Q9Y5U2 329 aaPredicted RBP11.02□□□□□ -0.65
IFT88-202ENST00000351808 hCG_38984A0A1B0GV85 526 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A10PA6NDY2 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A18PA6NE21 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A16PA6NEW6 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A20PA6NIJ5 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A8PA6NJQ4 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A7PA6NKC0 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A22PA8MWA6 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A12PA8MX19 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A5PA8MXJ8 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A23PA8MXZ1 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 F2RL2O00254 374 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A15PP0C7V4 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A13PP0C7W8 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A14PP0C7W9 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM90A24PP0C7X0 464 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 REG1BP48304 166 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FGF12P61328 243 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 KLF5Q13887 457 aaPredicted RBP11.01□□□□□ -0.65
IFT88-202ENST00000351808 TIGITQ495A1 244 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 C10orf128Q5T292 105 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 WDR74Q6RFH5 385 aaPredicted RBP11.01□□□□□ -0.65
IFT88-202ENST00000351808 BPIFA4PQ86YQ2 179 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 DRAM1Q8N682 238 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 SPCS1Q9Y6A9 102 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 SYNGR3O43761 229 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 TFF2Q03403 129 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 SSX8Q7RTT4 187 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 C7orf61Q8IZ16 206 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 SSMEM1Q8WWF3 244 aa11.01□□□□□ -0.65
IFT88-202ENST00000351808 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
IFT88-202ENST00000351808 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
IFT88-202ENST00000351808 C15orf62A8K5M9 175 aa11□□□□□ -0.65
IFT88-202ENST00000351808 LEPROTL1O95214 131 aa11□□□□□ -0.65
IFT88-202ENST00000351808 HBZP02008 142 aa11□□□□□ -0.65
IFT88-202ENST00000351808 SUMO3P55854 103 aaPredicted RBP11□□□□□ -0.65
IFT88-202ENST00000351808 RAB31Q13636 194 aa11□□□□□ -0.65
IFT88-202ENST00000351808 SPATA46Q5T0L3 261 aa11□□□□□ -0.65
IFT88-202ENST00000351808 KIR2DS5A0A0G2JLQ3 304 aa11□□□□□ -0.65
IFT88-202ENST00000351808 A0A0G2JNG1 304 aa11□□□□□ -0.65
IFT88-202ENST00000351808 KIR2DS3K7RE56 304 aa11□□□□□ -0.65
IFT88-202ENST00000351808 ISLRO14498 428 aa11□□□□□ -0.65
IFT88-202ENST00000351808 CAMPP49913 170 aa11□□□□□ -0.65
IFT88-202ENST00000351808 KIR2DS5Q14953 304 aa11□□□□□ -0.65
IFT88-202ENST00000351808 CCDC144NLQ6NUI1 221 aa11□□□□□ -0.65
IFT88-202ENST00000351808 BHLHA15Q7RTS1 189 aaPredicted RBP11□□□□□ -0.65
IFT88-202ENST00000351808 NHLRC2Q8NBF2 726 aa11□□□□□ -0.65
IFT88-202ENST00000351808 OR2Z1Q8NG97 314 aa11□□□□□ -0.65
IFT88-202ENST00000351808 ZNHIT1O43257 154 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 VSTM2AQ8TAG5 236 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 VWCEQ96DN2 955 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 MGST2Q99735 147 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 C1RLQ9NZP8 487 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 TNRC6AQ8NDV7 1962 aaKnown RBP10.99□□□□□ -0.65
IFT88-202ENST00000351808 TMEM265A0A087WTH1 108 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 IGHV5-51A0A0C4DH38 117 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.99□□□□□ -0.65
IFT88-202ENST00000351808 OPRK1P41145 380 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 GPM6AP51674 278 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 KIR3DS1Q14943 382 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
IFT88-202ENST00000351808 TREML4Q6UXN2 200 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 Q6ZSR6 202 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 TMEM54Q969K7 222 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 POM121L2Q96KW2 1035 aa10.99□□□□□ -0.65
IFT88-202ENST00000351808 ZNF488Q96MN9 340 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms