RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 RALGAPA1Q6GYQ0 2036 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 PINLYPA6NC86 204 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 C9orf172C9J069 976 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 CSRP2Q16527 193 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 OR4A47Q6IF82 309 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 GOLT1AQ6ZVE7 132 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 ARHGEF17Q96PE2 2063 aaPredicted RBP13.51□□□□□ -0.25
PTPN11-201ENST00000351677 LINC00518Q8N0U6 118 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 ZCCHC14Q8WYQ9 949 aaKnown RBP13.51□□□□□ -0.25
PTPN11-201ENST00000351677 KLHDC3Q9BQ90 382 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 TMEM56-RWDD3S4R434 201 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 IGFBP2P18065 325 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 S4R3C0 116 aa13.51□□□□□ -0.25
PTPN11-201ENST00000351677 SNRNP200O75643 2136 aaKnown RBP13.51□□□□□ -0.25
PTPN11-201ENST00000351677 B9A039 149 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 CDK2AP1O14519 115 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 LBHQ53QV2 105 aaPredicted RBP13.5□□□□□ -0.25
PTPN11-201ENST00000351677 TMEM105Q8N8V8 129 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 KIF26BQ2KJY2 2108 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 FGFBP3Q8TAT2 258 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 CARHSP1Q9Y2V2 147 aaKnown RBP13.5□□□□□ -0.25
PTPN11-201ENST00000351677 CGAP01215 116 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 TMEM30BQ3MIR4 351 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 CYP2G1PQ6ZSU1 146 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 CHODLQ9H9P2 273 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 EFNA2O43921 213 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 HINT1P49773 126 aaPredicted RBP13.5□□□□□ -0.25
PTPN11-201ENST00000351677 DLX1P56177 255 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 BSPH1Q075Z2 132 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 LYRM7Q5U5X0 104 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 SIP14410 1827 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 CBLN1P23435 193 aa13.5□□□□□ -0.25
PTPN11-201ENST00000351677 MRPL32Q9BYC8 188 aaKnown RBP13.5□□□□□ -0.25
PTPN11-201ENST00000351677 MRPS18CQ9Y3D5 142 aaKnown RBP13.5□□□□□ -0.25
PTPN11-201ENST00000351677 LEPROTL1O95214 131 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 IL4P05112 153 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 C18orf12Q96KH6 178 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 CDC42EP3Q9UKI2 254 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 IGHV3-23P01764 117 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 APOBEC3AP31941 199 aaPredicted RBP13.49□□□□□ -0.25
PTPN11-201ENST00000351677 C19orf24Q9BVV8 132 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 AUP1Q9Y679 476 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 TRAV30A0A087WSZ9 112 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 IQCF6A8MYZ5 107 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 SRP19P09132 144 aaKnown RBP13.49□□□□□ -0.25
PTPN11-201ENST00000351677 CCL1P22362 96 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 EBLN2Q6P2I7 272 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 IGKV1D-8A0A087WSZ0 117 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 COMPP49747 757 aaPredicted RBP13.49□□□□□ -0.25
PTPN11-201ENST00000351677 DNM1P46Q6ZS02 220 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 ZNF502Q8TBZ5 544 aa13.49□□□□□ -0.25
PTPN11-201ENST00000351677 ZMAT5Q9UDW3 170 aaKnown RBP13.49□□□□□ -0.25
PTPN11-201ENST00000351677 NPIPB11E5RHQ5 1161 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 TMEM250H0YL14 139 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 UQCRFS1P47985 274 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 C1orf162Q8NEQ5 155 aaPredicted RBP13.48□□□□□ -0.25
PTPN11-201ENST00000351677 IGHV3OR16-13A0A075B7E8 117 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 IGKV3D-15A0A087WSY6 115 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 IGHV3-74A0A0B4J1X5 117 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 IGKV3-15P01624 115 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 GATAD1Q8WUU5 269 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 KBTBD11-OT1A0A1B0GTJ5 212 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 GFRA3O60609 400 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 FBXL15Q9H469 300 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 CIDEAO60543 219 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 SS18L1O75177 396 aaPredicted RBP13.48□□□□□ -0.25
PTPN11-201ENST00000351677 SRSF3P84103 164 aaKnown RBP13.48□□□□□ -0.25
PTPN11-201ENST00000351677 PSG9Q00887 426 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 A0A1W2PS18 150 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 ANOS1P23352 680 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 COL5A1-AS1Q5SY13 56 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 ATOH7Q8N100 152 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 ABHD17AQ96GS6 310 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
PTPN11-201ENST00000351677 H0YIZ8 118 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 SLC17A3O00476 420 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 TCF21O43680 179 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 CX3CL1P78423 397 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 TRBV6-7A0A0A0MS04 114 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 ATP5G3P48201 142 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 PIMREGQ9BSJ6 248 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 COX6B1P14854 86 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 ZNF525Q8N782 197 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 M0R3E3 92 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 CRXO43186 299 aaPredicted RBP13.47□□□□□ -0.25
PTPN11-201ENST00000351677 ZFP36L1Q07352 338 aaKnown RBP13.47□□□□□ -0.25
PTPN11-201ENST00000351677 FBLN5Q9UBX5 448 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 PRB3Q04118 309 aaPredicted RBP13.47□□□□□ -0.25
PTPN11-201ENST00000351677 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
PTPN11-201ENST00000351677 C2orf83Q53S99 150 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 MRPL20Q9BYC9 149 aaKnown RBP13.47□□□□□ -0.25
PTPN11-201ENST00000351677 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
PTPN11-201ENST00000351677 GATA2P23769 480 aaPredicted RBP13.46□□□□□ -0.25
PTPN11-201ENST00000351677 ATP5G2Q06055 141 aa13.46□□□□□ -0.25
PTPN11-201ENST00000351677 DDTP30046 118 aa13.46□□□□□ -0.25
PTPN11-201ENST00000351677 ATP5J2P56134 94 aa13.46□□□□□ -0.25
PTPN11-201ENST00000351677 OR4B1Q8NGF8 309 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms