RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 RND1Q92730 232 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 A8MWV9 139 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 CCL20P78556 96 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 FOXL1Q12952 345 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.68□□□□□ -0.549e-28■■■■■ 57.4
TRIO-202ENST00000344204 PATE1Q8WXA2 126 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 COL11A2P13942 1736 aaPredicted RBP11.68□□□□□ -0.54
TRIO-202ENST00000344204 ZNF818PQ6ZRF7 136 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 RBPMS2Q6ZRY4 209 aaKnown RBP11.68□□□□□ -0.54
TRIO-202ENST00000344204 LTBP4Q8N2S1 1624 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 ZNF645Q8N7E2 425 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 RTN4RL2Q86UN3 420 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 MGPP08493 103 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 ZNF585BQ52M93 769 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 AMELYQ99218 206 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 NGBQ9NPG2 151 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 ATP23Q9Y6H3 246 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 H0Y8X5 98 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 CD5LO43866 347 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 J3QR06 171 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 OR51G1Q8NGK1 321 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
TRIO-202ENST00000344204 SYNGR1O43759 233 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 DEFB115Q30KQ5 88 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.68□□□□□ -0.54
TRIO-202ENST00000344204 CDKN1AP38936 164 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 DUSP2Q05923 314 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 LRTM2Q8N967 370 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 OR2H1Q9GZK4 316 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 DNM1P46Q6ZS02 220 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 NUP37Q8NFH4 326 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 A0A1B0GUT8 65 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 MRPS21P82921 87 aaKnown RBP11.67□□□□□ -0.54
TRIO-202ENST00000344204 DLX4Q92988 240 aaPredicted RBP11.67□□□□□ -0.54
TRIO-202ENST00000344204 C2orf83Q53S99 150 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 RSPO2Q6UXX9 243 aaPredicted RBP11.67□□□□□ -0.54
TRIO-202ENST00000344204 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 TFF3Q07654 80 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 GPR35Q9HC97 309 aa11.67□□□□□ -0.54
TRIO-202ENST00000344204 DNAL4O96015 105 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 PRSS53Q2L4Q9 553 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 CCL4L1Q8NHW4 92 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FOXL2P58012 376 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 RRHO14718 337 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 TIMP3P35625 211 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 SPANXN1Q5VSR9 72 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 A0A1W2PQD3 144 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 J3QRE1 110 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 CXCL13O43927 109 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 GPR6P46095 362 aaPredicted RBP11.66□□□□□ -0.54
TRIO-202ENST00000344204 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
TRIO-202ENST00000344204 TMEM95Q3KNT9 176 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 OR2Z1Q8NG97 314 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 C1QTNF9P0C862 333 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 RAC3P60763 192 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 LRRC10Q5BKY1 277 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 C3orf80F5H4A9 247 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 NGFRP08138 427 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 AGBL5Q8NDL9 886 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 RAXQ9Y2V3 346 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A10PA6NDY2 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A18PA6NE21 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A16PA6NEW6 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A20PA6NIJ5 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A8PA6NJQ4 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A7PA6NKC0 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A22PA8MWA6 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A12PA8MX19 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A5PA8MXJ8 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A23PA8MXZ1 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 KLRC4-KLRK1H3BQV0 150 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A15PP0C7V4 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A13PP0C7W8 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A14PP0C7W9 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM90A24PP0C7X0 464 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 MOB3BQ86TA1 216 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FOXC2Q99958 501 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 PSG6Q00889 435 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 ASPHD2Q6ICH7 369 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 FAM222BQ8WU58 562 aa11.66□□□□□ -0.54
TRIO-202ENST00000344204 CEACAM18A8MTB9 384 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 RND2P52198 227 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 MBNL2Q5VZF2 373 aaKnown RBP11.65□□□□□ -0.54
TRIO-202ENST00000344204 TMPRSS3P57727 454 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 FGFRL1Q8N441 504 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 GPHA2Q96T91 129 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 NAA38Q9BRA0 125 aaKnown RBP11.65□□□□□ -0.54
TRIO-202ENST00000344204 PRSS2P07478 247 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 MRPL43Q8N983 215 aaKnown RBP11.65□□□□□ -0.54
TRIO-202ENST00000344204 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 BHLHA15Q7RTS1 189 aaPredicted RBP11.65□□□□□ -0.54
TRIO-202ENST00000344204 APOBEC4Q8WW27 367 aaKnown RBP11.65□□□□□ -0.54
TRIO-202ENST00000344204 C8orf44Q96CB5 159 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 C18orf15Q96N68 181 aa11.65□□□□□ -0.54
TRIO-202ENST00000344204 NEUROG3Q9Y4Z2 214 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms