RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 LINC00614P0C842 121 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 GATA2P23769 480 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 RNASE4P34096 147 aaKnown RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 TXNDC17Q9BRA2 123 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 FOXA2Q9Y261 457 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 LOC105371242A0A075B767 164 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 WISP3O95389 354 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 NPCDR1Q9BY65 106 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 TBX6O95947 436 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 FAM201AQ5SY85 155 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 RCC1LQ96I51 464 aaKnown RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 NPFFR1Q9GZQ6 430 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 MEGF9Q9H1U4 602 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 AHDC1Q5TGY3 1603 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 C1orf100Q5SVJ3 147 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 ALKBH7Q9BT30 221 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 ZNF146Q15072 292 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 GLMPQ8WWB7 406 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 DUSP15Q9H1R2 295 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 EEF1AKMT3Q96AZ1 226 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 CLDN16Q9Y5I7 305 aa10.34□□□□□ -0.75
SEMA6A-202ENST00000343348 LY75O60449 1722 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 A0A1W2PQM1 296 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 TBR1Q16650 682 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 WDYHV1Q96HA8 205 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 COL11A1P12107 1806 aaPredicted RBP10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 TRAV30A0A087WSZ9 112 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 H3BUT2 72 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 LIPFP07098 398 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 SHISA5Q8N114 240 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 AICDAQ9GZX7 198 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 TNFRSF18Q9Y5U5 241 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 TRAV8-2A0A0B4J237 113 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 LOC105371267A0A1B0GV96 52 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 SSBP4Q9BWG4 385 aaPredicted RBP10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 FAM90A26D6RGX4 464 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 CD69Q07108 199 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 RNASE7Q9H1E1 156 aaKnown RBP10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 CABIN1Q9Y6J0 2220 aa10.33□□□□□ -0.76
SEMA6A-202ENST00000343348 PRR33A8MZF0 331 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 TRBV7-9A0A0J9YWB2 115 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 LINC00587B1AMM8 73 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 NPIPB11E5RHQ5 1161 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 ITLN2Q8WWU7 325 aaPredicted RBP10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 TMEM101Q96IK0 257 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 PILRAQ9UKJ1 303 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 LRP5O75197 1615 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 SFTPCP11686 197 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 TEX45Q8NA69 505 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 SYNGR3O43761 229 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 ADMP35318 185 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 SRSF3P84103 164 aaKnown RBP10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 FAM71F2Q6NXP2 309 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 CLDND2Q8NHS1 167 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 ATAD5Q96QE3 1844 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 NBEAP1P0C6P0 100 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 UNQ9370/PRO34162Q6UXP9 181 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 TTC9CQ8N5M4 171 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 JPT1Q9UK76 154 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 IGKV1D-42A0A075B6H8 117 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 NPIPB4C9JG80 1138 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 TRGV3P03979 118 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 COX6B1P14854 86 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 HTN3P15516 51 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 TMPRSS3P57727 454 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 MTURNQ8N3F0 131 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 DEFB104AQ8WTQ1 72 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 FBLIM1Q8WUP2 373 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 SCARF2Q96GP6 870 aaPredicted RBP10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 C2orf88Q9BSF0 95 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 FBXL15Q9H469 300 aa10.32□□□□□ -0.76
SEMA6A-202ENST00000343348 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 LEPP41159 167 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 GNG5P63218 68 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 SAMD13Q5VXD3 122 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 SDHCQ99643 169 aaPredicted RBP10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 PIMREGQ9BSJ6 248 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 CLEC7AQ9BXN2 247 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 CACNA1IQ9P0X4 2223 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 PRR31Q5SQ13 230 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 MIR17HGQ75NE6 70 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 PKIBQ9C010 78 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 LINC01560Q8TB33 94 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 TNFSF10P50591 281 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 LHFPL4Q7Z7J7 247 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 DUX3Q96PT4 197 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 SPSB2Q99619 263 aa10.31□□□□□ -0.76
SEMA6A-202ENST00000343348 IGHV1-69-2A0A0G2JMI3 117 aa10.3□□□□□ -0.76
SEMA6A-202ENST00000343348 PQLC2LA1A4F0 135 aa10.3□□□□□ -0.76
SEMA6A-202ENST00000343348 A0A1W2PRX2 142 aa10.3□□□□□ -0.76
SEMA6A-202ENST00000343348 C17orf98A8MV24 154 aa10.3□□□□□ -0.76
SEMA6A-202ENST00000343348 EVI2AP22794 236 aa10.3□□□□□ -0.76
SEMA6A-202ENST00000343348 TSPOP30536 169 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms