RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 TMEM183AQ8IXX5 376 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 RNF7Q9UBF6 113 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 IL19Q9UHD0 177 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 ATMQ13315 3056 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 TRGV10A0A0A0MS01 117 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 F6UZH7 168 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 ARL14EPLP0DKL9 152 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 CD99P14209 185 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 THBS3P49746 956 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 C1orf185Q5T7R7 199 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 CST9LP1Q5W188 147 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 MIC13Q5XKP0 118 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 OR4A47Q6IF82 309 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 Q6ZS92 163 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 C1orf159Q96HA4 380 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 PCGF1Q9BSM1 259 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 SCNM1Q9BWG6 230 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 NPVFQ9HCQ7 196 aa11.98□□□□□ -0.49
TDP2-201ENST00000341060 CXorf1O96002 111 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 TYMSP04818 313 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 HIST1H1BP16401 226 aaKnown RBP11.97□□□□□ -0.49
TDP2-201ENST00000341060 DUX4L9Q6RFH8 374 aaPredicted RBP11.97□□□□□ -0.49
TDP2-201ENST00000341060 TCF23Q7RTU1 214 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 ZNF439Q8NDP4 499 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 OR2T10Q8NGZ9 312 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 ADTRPQ96IZ2 230 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
TDP2-201ENST00000341060 PIEZO1Q92508 2521 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 APC2O95996 2303 aa11.97□□□□□ -0.49
TDP2-201ENST00000341060 TNCP24821 2201 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 NDUFB4O95168 129 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 IGHV1-46P01743 117 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 BMP5P22003 454 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 HSPE1P61604 102 aaKnown RBP11.96□□□□□ -0.49
TDP2-201ENST00000341060 POU2AF1Q16633 256 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 ARSJQ5FYB0 599 aaPredicted RBP11.96□□□□□ -0.49
TDP2-201ENST00000341060 ZNF383Q8NA42 475 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 SLC24A4Q8NFF2 622 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 GAFA1Q96PS6 74 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 PFDN5Q99471 154 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 DERL1Q9BUN8 251 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 SFXN3Q9BWM7 321 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 PRDM13Q9H4Q3 707 aa11.96□□□□□ -0.49
TDP2-201ENST00000341060 ZNF729A6NN14 1252 aaPredicted RBP11.96□□□□□ -0.5
TDP2-201ENST00000341060 NPY1RP25929 384 aa11.96□□□□□ -0.5
TDP2-201ENST00000341060 SELENOVP59797 346 aa11.96□□□□□ -0.5
TDP2-201ENST00000341060 MRPS11P82912 194 aaKnown RBP11.96□□□□□ -0.5
TDP2-201ENST00000341060 TNFAIP6P98066 277 aaPredicted RBP11.96□□□□□ -0.5
TDP2-201ENST00000341060 COA6Q5JTJ3 125 aaKnown RBP11.96□□□□□ -0.5
TDP2-201ENST00000341060 FAM209BQ5JX69 171 aa11.96□□□□□ -0.5
TDP2-201ENST00000341060 KCNIP4Q6PIL6 250 aa11.96□□□□□ -0.5
TDP2-201ENST00000341060 TEPPQ6URK8 271 aa11.96□□□□□ -0.5
TDP2-201ENST00000341060 LYG1Q8N1E2 194 aa11.96□□□□□ -0.5
TDP2-201ENST00000341060 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.5
TDP2-201ENST00000341060 LCN2P80188 198 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 ACTL10Q5JWF8 245 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 ACACAQ13085 2346 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 TRBV23-1A0A0A0MS06 115 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 KLK10O43240 276 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 IL6RP08887 468 aaPredicted RBP11.95□□□□□ -0.5
TDP2-201ENST00000341060 ZNF788Q6ZQV5 615 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 CISD2Q8N5K1 135 aaKnown RBP11.95□□□□□ -0.5
TDP2-201ENST00000341060 OR5T1Q8NG75 326 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 SSMEM1Q8WWF3 244 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 ACY3Q96HD9 319 aa11.95□□□□□ -0.5
TDP2-201ENST00000341060 RD3LP0DJH9 198 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 CEACAM8P31997 349 aaPredicted RBP11.94□□□□□ -0.5
TDP2-201ENST00000341060 CHRNA7P36544 502 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 EFNB3Q15768 340 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 CLEC12BQ2HXU8 276 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 TMEM30BQ3MIR4 351 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 C22orf34Q6ZV56 151 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 STPG3Q8N7X2 389 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 ZCCHC14Q8WYQ9 949 aaKnown RBP11.94□□□□□ -0.5
TDP2-201ENST00000341060 IMMP2LQ96T52 175 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 ENY2Q9NPA8 101 aa11.94□□□□□ -0.5
TDP2-201ENST00000341060 ANKRD11Q6UB99 2663 aaPredicted RBP11.94□□□□□ -0.5
TDP2-201ENST00000341060 TRBV20OR9-2A0A075B6H5 130 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 FNDC10F2Z333 226 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 CA2P00918 260 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 TNFSF4P23510 183 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 RPL29P47914 159 aaKnown RBP11.93□□□□□ -0.5
TDP2-201ENST00000341060 PDLIM4P50479 330 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 FAM216BQ8N7L0 139 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
TDP2-201ENST00000341060 CORO2AQ92828 525 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 XKRY2A2RUG3 117 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 CRYABP02511 175 aaKnown RBP11.93□□□□□ -0.5
TDP2-201ENST00000341060 CD40P25942 277 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 GNG10P50151 68 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 RHOBP62745 196 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 RAB31Q13636 194 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 SLC25A48Q6ZT89 311 aaKnown RBP11.93□□□□□ -0.5
TDP2-201ENST00000341060 TMEM144Q7Z5S9 345 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 ZNF114Q8NC26 417 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 NEUROG1Q92886 237 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms