RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZNF429Q86V71 674 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 OR4A5Q8NH83 315 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 ZDHHC16Q969W1 377 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 MALSU1Q96EH3 234 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 SMIM8Q96KF7 97 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 TSNAXQ99598 290 aaKnown RBP13.97□□□□□ -0.17
CLDN4-201ENST00000340958 HIPK2Q9H2X6 1198 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 FOXA2Q9Y261 457 aaPredicted RBP13.97□□□□□ -0.17
CLDN4-201ENST00000340958 WNK2Q9Y3S1 2297 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 CENPVL3A0A0U1RRI6 287 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 TAAR5O14804 337 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 TMEM50AO95807 157 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 TGFAP01135 160 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 FGF2P09038 288 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 CD1BP29016 333 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 SAA4P35542 130 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 NHLH2Q02577 135 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 COMMD7Q86VX2 200 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 TMEM252Q8N6L7 170 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 OR52E5Q8NH55 327 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 RITA1Q96K30 269 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 COMMD5Q9GZQ3 224 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 ZANQ9Y493 2812 aa13.97□□□□□ -0.17
CLDN4-201ENST00000340958 TRAV40A0A0B4J280 105 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 IGSF23A1L1A6 192 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 IGKV1D-33P01593 117 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 IGKV1-33P01594 117 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 OPN1MWP04001 364 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 OPN1MW2P0DN77 364 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 OPN1MW3P0DN78 364 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 PAX9P55771 341 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 TAS2R30P59541 319 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 TMEM267Q0VDI3 215 aaPredicted RBP13.96□□□□□ -0.17
CLDN4-201ENST00000340958 HNF4GQ14541 408 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 PLGLAQ15195 96 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 PUSL1Q8N0Z8 303 aaKnown RBP13.96□□□□□ -0.17
CLDN4-201ENST00000340958 TMEM217Q8N7C4 229 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 TMUB1Q9BVT8 246 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 C11orf1Q9H5F2 150 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 HEYLQ9NQ87 328 aaPredicted RBP13.96□□□□□ -0.17
CLDN4-201ENST00000340958 TMEM14BQ9NUH8 114 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 FBXL17Q9UF56 701 aa13.96□□□□□ -0.17
CLDN4-201ENST00000340958 A0A096LNT2 108 aa13.95□□□□□ -0.18
CLDN4-201ENST00000340958 CST7O76096 145 aa13.95□□□□□ -0.18
CLDN4-201ENST00000340958 VENTXO95231 258 aa13.95□□□□□ -0.18
CLDN4-201ENST00000340958 CD24P25063 80 aa13.95□□□□□ -0.18
CLDN4-201ENST00000340958 HSPE1P61604 102 aaKnown RBP13.95□□□□□ -0.18
CLDN4-201ENST00000340958 RPL8P62917 257 aaKnown RBP13.95□□□□□ -0.18
CLDN4-201ENST00000340958 UBA52P62987 128 aaKnown RBP13.95□□□□□ -0.18
CLDN4-201ENST00000340958 RPP30P78346 268 aaKnown RBP13.95□□□□□ -0.18
CLDN4-201ENST00000340958 AANATQ16613 207 aa13.95□□□□□ -0.18
CLDN4-201ENST00000340958 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
CLDN4-201ENST00000340958 IGHV1-69DA0A0B4J2H0 117 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 ACTL6BO94805 426 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 MOSP00540 346 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 IGLV2-23P01705 113 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 IGHV1-69P01742 117 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 CD99P14209 185 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 BRS3P32247 399 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 BAXQ07812 192 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 C1orf159Q96HA4 380 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 RNF5Q99942 180 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 PLEKHA3Q9HB20 300 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 STRAPQ9Y3F4 350 aaKnown RBP13.94□□□□□ -0.18
CLDN4-201ENST00000340958 BORCS7-ASMTA0A0B4J1R7 106 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 I3L521 148 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 LY86O95711 162 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 SNRNP70P08621 437 aaKnown RBP13.94□□□□□ -0.18
CLDN4-201ENST00000340958 METTL15P1P0C7V9 234 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 TPT1P13693 172 aaKnown RBP13.94□□□□□ -0.18
CLDN4-201ENST00000340958 SULT1A1P50225 295 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 EIF5AP63241 154 aaKnown RBP13.94□□□□□ -0.18
CLDN4-201ENST00000340958 CLINT1Q14677 625 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 MMDQ15546 238 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 AARDQ4LEZ3 155 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 RUSC1-AS1Q66K80 236 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 DYNAPQ8N1N2 210 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 OR2T10Q8NGZ9 312 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 TMEM167AQ8TBQ9 72 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 LRRC20Q8TCA0 184 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 ST8SIA2Q92186 375 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 KIAA1456Q9P272 454 aa13.94□□□□□ -0.18
CLDN4-201ENST00000340958 METTL1Q9UBP6 276 aaKnown RBP13.94□□□□□ -0.18
CLDN4-201ENST00000340958 LOC105371267A0A1B0GV96 52 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 IFNA10P01566 189 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 FAM106CPP0CH98 169 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 MYOD1P15172 320 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 CNTFRP26992 372 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 RAB14P61106 215 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 PSG5Q15238 335 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 TMEM249Q2WGJ8 235 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 CIARTQ8N365 385 aaPredicted RBP13.93□□□□□ -0.18
CLDN4-201ENST00000340958 PIP4P2Q8N4L2 257 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 TEX45Q8NA69 505 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 OR1S2Q8NGQ3 325 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 OR5B3Q8NH48 314 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 CFHR4Q92496 578 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 ZNF257Q9Y2Q1 563 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 FAM96BQ9Y3D0 163 aa13.93□□□□□ -0.18
CLDN4-201ENST00000340958 CR1P17927 2039 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms